Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc622.3 Carica papaya HOM05D000458 ORTHO05D004796 2.4e-72 275.4 140 100.0
TWI38G0342 Tripterygium wilfordii HOM05D000458 ORTHO05D004796 4.9e-41 171.4 116 75.0
TWI39G1101 Tripterygium wilfordii HOM05D000458 ORTHO05D004796 7.8e-39 164.1 116 73.3
Dinv20197 Davidia involucrata HOM05D000458 ORTHO05D004796 3.3e-37 158.7 116 71.6
Potri.001G397600 Populus trichocarpa HOM05D000458 ORTHO05D004796 1.6e-36 156.4 116 69.0
Thecc.07G095400 Theobroma cacao HOM05D000458 ORTHO05D004796 2.1e-36 156.0 115 70.4
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 4.8e-36 154.8 114 68.4
Haze_09451 Corylus avellana HOM05D000458 ORTHO05D004796 8.1e-36 154.1 115 67.8
Duzib213G0712 Durio zibethinus HOM05D000458 ORTHO05D004796 2.4e-35 152.5 115 67.0
Duzib170G0212 Durio zibethinus HOM05D000458 ORTHO05D004796 3.1e-35 152.1 115 68.7
Eucgr.F01158 Eucalyptus grandis HOM05D000458 ORTHO05D004796 4.0e-35 151.8 112 68.8
Lj1A840T52 Lonicera japonica HOM05D000458 ORTHO05D004796 9.0e-35 150.6 118 66.1
Dinv14934 Davidia involucrata HOM05D000458 ORTHO05D004796 2.0e-34 149.4 116 65.5
GSVIVG01014297001 Vitis vinifera HOM05D000458 ORTHO05D004796 3.4e-34 148.7 112 67.0
CSS0021889 Camellia sinensis var. sinensis HOM05D000458 ORTHO05D004796 4.5e-34 148.3 116 64.7
CiPaw.12G120000 Carya illinoinensis HOM05D000458 ORTHO05D004796 4.5e-34 148.3 116 66.4
CiPaw.11G171700 Carya illinoinensis HOM05D000458 ORTHO05D004796 1.3e-33 146.7 116 66.4
RcHm_v2.0_Chr5g0032781 Rosa chinensis HOM05D000458 ORTHO05D004796 1.3e-33 146.7 119 63.0
CSS0014493 Camellia sinensis var. sinensis HOM05D000458 ORTHO05D004796 2.9e-33 145.6 116 64.7
CSS0025002 Camellia sinensis var. sinensis HOM05D000458 ORTHO05D004796 2.9e-33 145.6 116 64.7
vmacro11884 Vaccinium macrocarpon HOM05D000458 ORTHO05D004796 2.9e-33 145.6 116 65.5
Potri.011G116300 Populus trichocarpa HOM05D000458 ORTHO05D004796 3.8e-33 145.2 109 68.8
Rhsim06G0201500 Rhododendron simsii HOM05D000458 ORTHO05D004796 4.9e-33 144.8 116 64.7
Ciclev10007625m.g Citrus clementina HOM05D000458 ORTHO05D004796 6.4e-33 144.4 116 68.1
DCAR_020994 Daucus carota HOM05D000458 ORTHO05D004796 6.4e-33 144.4 114 60.5
Gohir.A04G035100 Gossypium hirsutum HOM05D000458 ORTHO05D004796 6.4e-33 144.4 106 69.8
Actinidia09699 Actinidia chinensis HOM05D000458 ORTHO05D004796 8.4e-33 144.1 115 65.2
FAN21G0672 Fragaria x ananassa HOM05D000458 ORTHO05D004796 1.9e-32 142.9 119 62.2
FAN25G3598 Fragaria x ananassa HOM05D000458 ORTHO05D004796 1.9e-32 142.9 119 62.2
Gohir.D05G348300 Gossypium hirsutum HOM05D000458 ORTHO05D004796 1.9e-32 142.9 106 68.9
Duzib244G0005 Durio zibethinus HOM05D000458 ORTHO05D004796 3.2e-32 142.1 106 67.9
Duzib268G0440 Durio zibethinus HOM05D000458 ORTHO05D004796 3.2e-32 142.1 106 67.9
FAN16G2185 Fragaria x ananassa HOM05D000458 ORTHO05D004796 3.2e-32 142.1 125 60.0
FAN11G2605 Fragaria x ananassa HOM05D000458 ORTHO05D004796 4.2e-32 141.7 119 62.2
FvH4_3g19600 Fragaria vesca HOM05D000458 ORTHO05D004796 5.4e-32 141.4 119 62.2
Prupe.4G176700 Prunus persica HOM05D000458 ORTHO05D004796 5.4e-32 141.4 119 64.7
TAR629G0109 Trochodendron aralioides HOM05D000458 ORTHO05D004796 2.1e-31 139.4 119 63.0
CANSAT56G2918 Cannabis sativa HOM05D000458 ORTHO05D004796 4.6e-31 138.3 114 63.2
TAR627G0899 Trochodendron aralioides HOM05D000458 ORTHO05D004796 7.9e-31 137.5 115 61.7
Gohir.A01G061500 Gossypium hirsutum HOM05D000458 ORTHO05D004796 2.3e-30 136.0 115 62.6
MD11G1252300 Malus domestica HOM05D000458 ORTHO05D004796 2.3e-30 136.0 119 62.2
PGR083G0851 Punica granatum HOM05D000458 ORTHO05D004796 2.3e-30 136.0 116 61.2
Manes.03G106600 Manihot esculenta HOM05D000458 ORTHO05D004796 3.0e-30 135.6 109 63.3
Gorai.009G376100 Gossypium raimondii HOM05D000458 ORTHO05D004796 3.9e-30 135.2 103 68.0
Lj3g0007512 Lotus japonicus HOM05D000458 ORTHO05D004796 3.9e-30 135.2 116 62.9
Gohir.D01G048100 Gossypium hirsutum HOM05D000458 ORTHO05D004796 8.7e-30 134.0 115 61.7
Nitab4.5_0002330g0040 Nicotiana tabacum HOM05D000458 ORTHO05D004796 8.7e-30 134.0 113 59.3
Glyma.12G162963 Glycine max HOM05D000458 ORTHO05D004796 1.1e-29 133.7 116 62.1
COL.COLO4_36710 Corchorus olitorius HOM05D000458 ORTHO05D004796 3.3e-29 132.1 102 70.6
SalBow7G2789 Salvia bowleyana HOM05D000458 ORTHO05D004796 3.3e-29 132.1 113 61.9
Glyma.06G238000 Glycine max HOM05D000458 ORTHO05D004796 4.3e-29 131.7 116 61.2
Aqoxy1G02338 Aquilegia oxysepala HOM05D000458 ORTHO05D004796 9.6e-29 130.6 116 59.5
Oeu037369.1 Olea europaea HOM05D000458 ORTHO05D004796 9.6e-29 130.6 112 62.5
ECA234G3073 Erigeron canadensis HOM05D000458 ORTHO05D004796 2.1e-28 129.4 115 60.0
CsaV3_4G033530 Cucumis sativus L. HOM05D000458 ORTHO05D004796 3.6e-28 128.6 115 60.0
Aa31LG10G1970 Aethionema arabicum HOM05D000458 ORTHO05D004796 4.8e-28 128.3 116 58.6
MELO3C025602.2 Cucumis melo HOM05D000458 ORTHO05D004796 8.1e-28 127.5 115 60.0
Glyma.12G226300 Glycine max HOM05D000458 ORTHO05D004796 8.1e-28 127.5 116 62.1
Phvul.005G074300 Phaseolus vulgaris HOM05D000458 ORTHO05D004796 8.1e-28 127.5 115 61.7
Glyma.13G274500 Glycine max HOM05D000458 ORTHO05D004796 1.1e-27 127.1 116 61.2
Lsat_1_v5_gn_5_128461 Lactuca sativa HOM05D000458 ORTHO05D004796 1.1e-27 127.1 116 57.8
Lalb_Chr25g0286251 Lupinus albus HOM05D000458 ORTHO05D004796 1.1e-27 127.1 116 56.9
Manes.15G089100 Manihot esculenta HOM05D000458 ORTHO05D004796 1.1e-27 127.1 116 62.1
Sabra11G0101900 Salix brachista HOM05D000458 ORTHO05D004796 1.8e-27 126.3 102 64.7
HanXRQChr15g0495451 Helianthus annuus HOM05D000458 ORTHO05D004796 3.1e-27 125.6 115 54.8
arahy.Tifrunner.gnm1.ann1.IF9FMX Arachis hypogaea HOM05D000458 ORTHO05D004796 4.0e-27 125.2 115 58.3
arahy.Tifrunner.gnm1.ann1.Q9DAYR Arachis hypogaea HOM05D000458 ORTHO05D004796 4.0e-27 125.2 116 56.9
Lj8C154G21 Lonicera japonica HOM05D000458 ORTHO05D004796 5.3e-27 124.8 109 62.4
THA.LOC104810460 Tarenaya hassleriana HOM05D000458 ORTHO05D004796 5.3e-27 124.8 113 55.8
THA.LOC104818087 Tarenaya hassleriana HOM05D000458 ORTHO05D004796 5.3e-27 124.8 115 57.4
MD03G1231300 Malus domestica HOM05D000458 ORTHO05D004796 1.2e-26 123.6 109 60.6
ClCG11G017900 Citrullus lanatus HOM05D000458 ORTHO05D004796 2.0e-26 122.9 114 57.9
Migut.H01953 Erythranthe guttata HOM05D000458 ORTHO05D004796 2.0e-26 122.9 114 60.5
MBI02_g22346_MAGBIO Magnolia biondii HOM05D000458 ORTHO05D004796 2.6e-26 122.5 119 53.8
Phvul.011G164700 Phaseolus vulgaris HOM05D000458 ORTHO05D004796 2.6e-26 122.5 116 57.8
Sed0018585 Sechium edule HOM05D000458 ORTHO05D004796 3.4e-26 122.1 115 55.7
Cc05_g11800 Coffea canephora HOM05D000458 ORTHO05D004796 4.5e-26 121.7 112 54.5
TPR.G7967 Trifolium pratense HOM05D000458 ORTHO05D004796 5.8e-26 121.3 116 57.8
HanXRQChr10g0302641 Helianthus annuus HOM05D000458 ORTHO05D004796 7.6e-26 120.9 106 57.5
ECA236G3680 Erigeron canadensis HOM05D000458 ORTHO05D004796 9.9e-26 120.6 115 51.3
Gorai.002G067900 Gossypium raimondii HOM05D000458 ORTHO05D004796 1.3e-25 120.2 146 49.3
Nn1g04174 Nelumbo nucifera HOM05D000458 ORTHO05D004796 1.7e-25 119.8 114 51.8
Sabra16G0260600 Salix brachista HOM05D000458 ORTHO05D004796 1.7e-25 119.8 109 59.6
Medtr2g078740 Medicago truncatula HOM05D000458 ORTHO05D004796 2.2e-25 119.4 116 56.9
Ca_03525_v3 Cicer arietinum L. HOM05D000458 ORTHO05D004796 2.9e-25 119.0 116 56.9
Sed0017869 Sechium edule HOM05D000458 ORTHO05D004796 3.8e-25 118.6 115 54.8
Peaxi162Scf00069g01722 Petunia axillaris HOM05D000458 ORTHO05D004796 6.4e-25 117.9 146 45.9
Gohir.A13G146700 Gossypium hirsutum HOM05D000458 ORTHO05D004796 8.4e-25 117.5 104 55.8
Psat5g241840 Pisum sativum HOM05D000458 ORTHO05D004796 8.4e-25 117.5 116 56.0
Nn1g06451 Nelumbo nucifera HOM05D000458 ORTHO05D004796 1.9e-24 116.3 116 53.4
AL1G61540 Arabidopsis lyrata HOM05D000458 ORTHO05D004796 2.4e-24 115.9 117 55.6
AUR62036173 Chenopodium quinoa HOM05D000458 ORTHO05D004796 3.2e-24 115.5 122 50.8
SGA_v2.0_scaffold73G24238 Striga asiatica HOM05D000458 ORTHO05D004796 5.5e-24 114.8 113 52.2
ATR0150G013 Amborella trichopoda HOM05D000458 ORTHO05D004796 7.1e-24 114.4 117 55.6
CARHR043390 Cardamine hirsuta HOM05D000458 ORTHO05D004796 9.3e-24 114.0 112 55.4
Carub.0001s4233 Capsella rubella HOM05D000458 ORTHO05D004796 1.2e-23 113.6 117 54.7
AUR62019457 Chenopodium quinoa HOM05D000458 ORTHO05D004796 1.6e-23 113.2 115 53.0
Lj3g0001084 Lotus japonicus HOM05D000458 ORTHO05D004796 1.6e-23 113.2 116 53.4
Sp1g39720 Schrenkiella parvula HOM05D000458 ORTHO05D004796 1.6e-23 113.2 117 53.8
BcaC08g44049 Brassica carinata HOM05D000458 ORTHO05D004796 2.1e-23 112.8 117 53.0
BolC6t36630H Brassica oleracea HOM05D000458 ORTHO05D004796 2.1e-23 112.8 117 53.0
BraA05t20749Z Brassica rapa HOM05D000458 ORTHO05D004796 2.1e-23 112.8 117 53.0
AT1G53165 Arabidopsis thaliana HOM05D000458 ORTHO05D004796 4.6e-23 111.7 117 53.0
BcaB02g10934 Brassica carinata HOM05D000458 ORTHO05D004796 4.6e-23 111.7 117 53.0
VMungo1080G1214 Vigna mungo HOM05D000458 ORTHO05D004796 4.6e-23 111.7 115 57.4
Lalb_Chr20g0109541 Lupinus albus HOM05D000458 ORTHO05D004796 6.0e-23 111.3 116 51.7
Lalb_Chr01g0016761 Lupinus albus HOM05D000458 ORTHO05D004796 1.3e-22 110.2 116 51.7
CAN.G162.39 Capsicum annuum HOM05D000458 ORTHO05D004796 3.0e-22 109.0 113 49.6
Nitab4.5_0005017g0020 Nicotiana tabacum HOM05D000458 ORTHO05D004796 5.1e-22 108.2 109 54.1
PSO541G3462 Papaver somniferum HOM05D000458 ORTHO05D004796 6.7e-22 107.8 115 50.4
PSO675G8241 Papaver somniferum HOM05D000458 ORTHO05D004796 6.7e-22 107.8 115 50.4
A05p34250 Brassica napus HOM05D000458 ORTHO05D004796 3.3e-21 105.5 112 49.1
BolC5t33886H Brassica oleracea HOM05D000458 ORTHO05D004796 3.3e-21 105.5 112 49.1
BraA05t22245Z Brassica rapa HOM05D000458 ORTHO05D004796 3.3e-21 105.5 112 49.1
AL3G27620 Arabidopsis lyrata HOM05D000458 ORTHO05D004796 4.3e-21 105.1 112 51.8
BcaB06g29546 Brassica carinata HOM05D000458 ORTHO05D004796 4.3e-21 105.1 112 50.0
C03p91200 Brassica napus HOM05D000458 ORTHO05D004796 5.6e-21 104.8 112 50.0
AT3G15220 Arabidopsis thaliana HOM05D000458 ORTHO05D004796 9.6e-21 104.0 112 52.7
Oeu051082.2 Olea europaea HOM05D000458 ORTHO05D004796 1.3e-20 103.6 102 54.9
Sopen07g031130 Solanum pennellii HOM05D000458 ORTHO05D004796 3.7e-20 102.1 113 46.9
Aa31LG8G2420 Aethionema arabicum HOM05D000458 ORTHO05D004796 4.8e-20 101.7 112 48.2
Lsat_1_v5_gn_7_104681 Lactuca sativa HOM05D000458 ORTHO05D004796 4.8e-20 101.7 103 50.5
Sp3g13430 Schrenkiella parvula HOM05D000458 ORTHO05D004796 1.4e-19 100.1 112 47.3
SGA_v2.0_scaffold34G13801 Striga asiatica HOM05D000458 ORTHO05D004796 1.8e-19 99.8 102 53.9
Carub.0003s1488 Capsella rubella HOM05D000458 ORTHO05D004796 5.3e-19 98.2 112 48.2
Solyc07g062940.4 Solanum lycopersicum HOM05D000458 ORTHO05D004796 9.0e-19 97.4 113 46.9
unitig_46.g18322 Utricularia gibba HOM05D000458 ORTHO05D004796 1.7e-17 93.2 106 52.8
DCAR_019567 Daucus carota HOM05D000458 ORTHO05D004796 2.9e-17 92.4 100 48.0
HPP92_010204 Vanilla planifolia HOM05D000458 ORTHO05D004796 2.9e-17 92.4 116 43.1
Hund22872 Selenicereus undatus HOM05D000458 ORTHO05D004796 6.5e-17 91.3 98 49.0
A05p18560 Brassica napus HOM05D000458 ORTHO05D004796 8.4e-17 90.9 105 49.5
C05p52010 Brassica napus HOM05D000458 ORTHO05D004796 1.1e-16 90.5 104 46.2
Ah.06g184510 Amaranthus hybridus HOM05D000458 ORTHO05D004796 1.4e-16 90.1 101 47.5
C06p14490 Brassica napus HOM05D000458 ORTHO05D004796 4.2e-16 88.6 107 48.6
SHI32859 Sapria himalayana HOM05D000458 ORTHO05D004796 1.3e-14 83.6 100 50.0
Os07g0507300 Oryza sativa ssp. japonica HOM05D000458 ORTHO05D004796 8.7e-14 80.9 116 43.1
Atru.chr2.2425 Acer truncatum HOM05D000458 ORTHO05D004796 1.1e-13 80.5 63 63.5
SEGI_19237 Sequoiadendron giganteum HOM05D000458 ORTHO05D004796 5.7e-13 78.2 114 39.5
EL10Ac4g08224 Beta vulgaris HOM05D000458 ORTHO05D004796 2.8e-12 75.9 96 43.8
Pp3c1_23810 Physcomitrium patens HOM05D000458 ORTHO05D004796 3.7e-12 75.5 115 38.3
Zm00001eb322360 Zea mays HOM05D000458 ORTHO05D004796 2.4e-11 72.8 116 41.4
CDE02G0939 Ceratophyllum demersum HOM05D000458 ORTHO05D004796 9.0e-11 70.9 81 43.2
Pp3c17_14200 Physcomitrium patens HOM05D000458 ORTHO05D004796 1.2e-10 70.5 117 37.6
SMO351G0517 Selaginella moellendorffii HOM05D000458 ORTHO05D004796 1.2e-10 70.5 122 35.2
Mapoly0133s0001 Marchantia polymorpha HOM05D000458 ORTHO05D004796 3.4e-10 68.9 123 35.0
Pp3c2_10350 Physcomitrium patens HOM05D000458 ORTHO05D004796 4.5e-10 68.6 118 36.4
Actinidia12795 Actinidia chinensis HOM05D000458 ORTHO05D004796 1.9e-08 63.2 79 46.8
BcaC01g01362 Brassica carinata HOM05D000458 ORTHO05D004796 1.9e-08 63.2 73 46.6
AagrBONN_evm.TU.Sc2ySwM_344.4386 Anthoceros agrestis HOM05D000458 ORTHO05D004796 3.2e-08 62.4 100 37.0


User provided reference genes

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