Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 7.8e-100 367.1 180 100.0
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 4.6e-68 261.5 181 74.0
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 5.1e-67 258.1 183 71.0
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 5.1e-67 258.1 169 78.7
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 1.1e-66 256.9 183 70.5
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 1.3e-65 253.4 191 69.1
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 2.8e-65 252.3 185 71.9
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 1.4e-64 250.0 169 74.6
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 5.3e-64 248.1 182 70.9
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 2.6e-63 245.7 187 67.9
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 2.6e-63 245.7 181 69.1
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 2.6e-63 245.7 181 69.1
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 3.4e-63 245.4 184 70.1
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 4.5e-63 245.0 185 71.4
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 5.9e-63 244.6 185 68.1
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 7.7e-63 244.2 183 69.4
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.0e-62 243.8 152 79.6
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 2.2e-62 242.7 154 78.6
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 3.8e-62 241.9 154 77.9
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 3.8e-62 241.9 187 66.8
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 1.1e-61 240.4 181 68.0
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 1.4e-61 240.0 184 66.8
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 2.5e-61 239.2 154 76.6
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 9.4e-61 237.3 184 68.5
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 1.2e-60 236.9 154 78.6
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 1.2e-60 236.9 183 68.3
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 1.6e-60 236.5 182 65.4
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 1.6e-60 236.5 184 66.8
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 2.1e-60 236.1 183 68.3
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 2.7e-60 235.7 161 73.3
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 2.7e-60 235.7 179 69.3
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 6.1e-60 234.6 184 65.8
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 7.9e-60 234.2 160 72.5
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 1.8e-59 233.0 183 67.2
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 3.9e-59 231.9 184 65.2
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 5.1e-59 231.5 159 73.6
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 5.1e-59 231.5 184 64.7
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 6.7e-59 231.1 141 80.1
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 6.7e-59 231.1 149 77.2
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 6.7e-59 231.1 141 80.1
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 6.7e-59 231.1 149 77.2
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 6.7e-59 231.1 190 65.8
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 6.7e-59 231.1 185 64.9
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 1.1e-58 230.3 177 66.1
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 2.6e-58 229.2 152 75.7
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 2.6e-58 229.2 154 74.0
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 2.6e-58 229.2 185 64.3
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 7.4e-58 227.6 184 65.8
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 2.2e-57 226.1 166 70.5
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 3.7e-57 225.3 141 78.0
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 4.8e-57 224.9 190 65.8
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 4.8e-57 224.9 188 61.7
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 6.3e-57 224.6 182 64.8
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 1.4e-56 223.4 175 65.7
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.4e-56 223.4 180 64.4
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 1.4e-56 223.4 181 63.5
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 2.4e-56 222.6 154 72.7
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 3.1e-56 222.2 187 62.0
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 5.3e-56 221.5 187 61.5
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 5.3e-56 221.5 141 75.2
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 1.2e-55 220.3 168 64.3
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 3.4e-55 218.8 159 69.2
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 4.5e-55 218.4 180 64.4
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 5.9e-55 218.0 182 63.2
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 1.3e-54 216.9 196 61.2
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 1.3e-54 216.9 177 63.8
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 1.7e-54 216.5 171 63.7
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 2.9e-54 215.7 189 61.9
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 3.8e-54 215.3 184 63.0
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 5.0e-54 214.9 168 66.7
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 6.5e-54 214.5 166 64.5
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 1.1e-53 213.8 165 64.2
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.1e-53 213.8 184 63.0
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 1.9e-53 213.0 180 63.9
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 3.2e-53 212.2 140 72.9
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 3.2e-53 212.2 172 65.1
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 4.2e-53 211.8 177 61.0
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 1.6e-52 209.9 170 64.7
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 3.6e-52 208.8 174 62.6
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 1.0e-51 207.2 174 62.1
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 1.8e-51 206.5 143 73.4
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 1.5e-50 203.4 141 70.9
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 5.7e-50 201.4 148 68.9
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 4.8e-49 198.4 107 88.8
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 4.8e-49 198.4 173 60.1
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 9.1e-48 194.1 190 54.2
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 2.0e-47 193.0 156 64.7
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 3.5e-47 192.2 107 86.9
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 1.5e-45 186.8 166 61.4
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 2.5e-45 186.0 136 70.6
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 4.2e-45 185.3 110 80.0
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 2.1e-44 183.0 138 63.0
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 8.0e-44 181.0 160 60.0
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 6.3e-41 171.4 142 59.9
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.8e-40 169.9 140 58.6
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 2.4e-40 169.5 142 59.9
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 9.1e-40 167.5 140 57.9
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 7.7e-39 164.5 126 64.3
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 3.8e-38 162.2 160 52.5
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 1.0e-35 154.1 120 63.3
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 3.7e-33 145.6 148 53.4
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 4.4e-26 122.1 70 80.0
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 4.4e-26 122.1 174 42.5
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 1.3e-25 120.6 70 78.6
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.6e-23 113.6 96 62.5
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 5.0e-22 108.6 101 58.4
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 2.8e-20 102.8 89 59.6
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 4.0e-19 99.0 109 50.5
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 5.7e-18 95.1 203 35.0
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 3.7e-17 92.4 77 59.7
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 5.4e-16 88.6 79 59.5
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 3.3e-13 79.3 136 36.8
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 2.1e-12 76.6 148 34.5
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 8.0e-12 74.7 73 56.2
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 6.0e-07 58.5 27 85.2
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 5.0e-06 55.5 79 45.6


User provided reference genes

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