Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 8.8e-119 430.3 210 100.0
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 4.6e-83 311.6 213 77.0
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.4e-79 300.1 211 73.0
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 2.3e-79 299.3 210 70.5
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 5.4e-76 288.1 210 70.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.3e-74 282.7 210 67.1
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.1e-73 280.4 217 66.4
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.5e-73 280.0 212 69.8
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.9e-73 279.6 209 65.1
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.9e-73 279.6 209 67.9
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.5e-73 279.3 209 65.1
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 3.3e-73 278.9 212 67.5
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 5.6e-73 278.1 214 69.2
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.6e-72 276.6 207 70.0
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 6.2e-72 274.6 211 67.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 6.2e-72 274.6 215 66.0
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 6.2e-72 274.6 215 66.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 8.1e-72 274.2 233 64.4
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.4e-71 273.5 218 64.7
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.4e-71 273.5 201 67.7
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.8e-71 273.1 209 65.6
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 3.1e-71 272.3 212 66.5
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 3.1e-71 272.3 212 65.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 4.0e-71 271.9 212 65.1
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 1.2e-70 270.4 212 65.6
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 7.5e-70 267.7 239 62.8
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.2e-69 266.2 210 65.7
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 3.7e-69 265.4 210 64.3
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 1.4e-68 263.5 209 66.0
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.9e-68 263.1 213 63.8
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 3.2e-68 262.3 212 66.0
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 5.4e-68 261.5 175 71.4
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 7.1e-68 261.2 213 62.4
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 9.2e-68 260.8 210 62.9
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.2e-67 260.4 211 63.0
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 2.7e-67 259.2 218 62.4
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 3.5e-67 258.8 210 64.3
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 4.6e-67 258.5 211 63.5
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.0e-67 258.1 171 71.9
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.3e-66 256.1 223 61.0
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 3.9e-66 255.4 209 60.3
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 3.9e-66 255.4 209 59.8
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 5.1e-66 255.0 209 60.3
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 6.6e-66 254.6 203 63.5
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.1e-65 253.8 213 62.4
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.3e-65 252.3 212 62.3
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 5.6e-65 251.5 187 63.6
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 7.3e-65 251.1 217 62.2
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 2.1e-64 249.6 184 65.8
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 3.6e-64 248.8 209 58.4
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.6e-64 248.8 206 58.3
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 8.1e-64 247.7 209 59.8
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 1.1e-63 247.3 209 59.3
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.4e-63 246.9 180 64.4
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.4e-63 246.9 169 69.2
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 5.2e-63 245.0 187 64.2
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 8.9e-63 244.2 205 64.4
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.2e-62 243.8 222 59.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.5e-62 243.4 210 60.5
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.0e-62 243.0 210 60.5
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 2.6e-62 242.7 183 65.0
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 4.4e-62 241.9 185 62.2
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 5.8e-62 241.5 190 63.7
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 7.6e-62 241.1 210 60.0
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 7.6e-62 241.1 179 64.8
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 7.6e-62 241.1 206 60.2
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 9.9e-62 240.7 217 60.4
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.3e-61 240.4 212 60.4
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.7e-61 240.0 171 64.3
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 2.2e-61 239.6 179 64.2
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 8.4e-61 237.7 210 61.9
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 1.1e-60 237.3 212 60.8
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.4e-60 236.9 212 61.3
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.4e-60 236.9 212 61.3
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.4e-60 236.9 212 61.3
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 1.9e-60 236.5 171 69.0
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 4.2e-60 235.3 214 59.3
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 5.4e-60 235.0 212 60.4
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.1e-59 233.0 211 57.8
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 2.1e-59 233.0 199 60.8
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 6.0e-59 231.5 204 61.3
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 7.8e-59 231.1 203 60.1
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 2.3e-58 229.6 170 61.8
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.0e-58 229.2 208 57.7
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 3.0e-58 229.2 184 63.6
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.1e-57 227.3 210 57.6
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.3e-57 225.3 182 59.3
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 5.6e-57 224.9 180 61.1
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.6e-56 223.4 167 65.3
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.6e-56 223.4 211 56.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 8.1e-56 221.1 215 54.9
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.4e-55 220.3 176 61.4
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 6.9e-55 218.0 180 59.4
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 9.0e-55 217.6 215 54.9
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.5e-54 216.9 208 56.7
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.1e-52 210.7 231 48.5
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.2e-51 207.2 207 54.6
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 2.1e-51 206.5 174 61.5
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 2.7e-51 206.1 166 60.2
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 6.6e-50 201.4 198 52.5
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 4.8e-48 195.3 161 59.6
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 6.2e-48 194.9 149 61.7
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 5.6e-41 171.8 233 45.9
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 5.8e-38 161.8 127 67.7
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 4.3e-33 145.6 170 47.1
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 4.3e-33 145.6 216 39.8
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 2.1e-32 143.3 106 72.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 4.8e-32 142.1 192 41.1
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 8.2e-32 141.4 175 45.1
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.4e-31 140.6 172 41.9
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 6.5e-29 131.7 221 40.7
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.0e-21 107.8 180 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.7e-21 107.1 221 33.0
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 6.5e-21 105.1 181 34.8
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 8.5e-21 104.8 89 57.3
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.0e-18 97.8 195 32.8
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 2.8e-16 89.7 102 50.0
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 2.0e-14 83.6 131 38.9
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 4.5e-14 82.4 101 46.5
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.3e-10 70.1 173 30.6
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 2.8e-08 63.2 47 53.2
Cfa020839 Carpinus fangiana HOM05D006662 ORTHO05D008378 2.6e-06 56.6 49 61.2
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 7.7e-06 55.1 45 55.6


User provided reference genes

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