Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 2.0e-234 815.5 422 100.0
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 5.5e-128 461.8 340 70.6
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 9.7e-125 451.1 342 69.6
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 7.7e-122 441.4 335 70.1
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 6.5e-121 438.3 336 67.6
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 4.2e-120 435.6 340 68.2
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.3e-116 424.1 333 67.9
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.7e-116 423.7 354 63.8
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.1e-115 421.0 333 67.0
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 1.8e-115 420.2 333 67.0
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 2.9e-113 412.9 331 64.4
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 1.9e-112 410.2 298 68.8
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 9.4e-112 407.9 326 65.6
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.2e-111 407.5 331 65.6
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 2.1e-111 406.8 337 63.5
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 2.7e-111 406.4 334 64.7
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 3.6e-111 406.0 359 62.1
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 4.7e-111 405.6 354 63.6
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 3.0e-110 402.9 332 65.7
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 5.2e-110 402.1 341 61.6
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 6.7e-110 401.7 337 65.0
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 2.6e-109 399.8 332 65.4
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 5.7e-109 398.7 332 65.1
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 5.7e-109 398.7 332 65.4
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 9.7e-109 397.9 318 64.2
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 9.7e-109 397.9 318 64.2
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 1.3e-108 397.5 327 65.1
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 1.7e-108 397.1 330 63.3
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 8.2e-108 394.8 338 64.2
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 8.2e-108 394.8 343 62.7
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 8.2e-108 394.8 359 59.1
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 2.4e-107 393.3 346 61.0
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 1.2e-106 391.0 332 63.3
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 2.0e-106 390.2 333 62.2
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 3.5e-106 389.4 352 59.9
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-106 389.0 345 60.3
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-106 389.0 345 60.3
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-106 389.0 345 60.3
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-106 389.0 345 60.3
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 4.5e-106 389.0 330 63.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 1.7e-105 387.1 324 61.7
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 2.9e-105 386.3 353 59.5
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 6.5e-105 385.2 336 62.2
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 8.5e-105 384.8 339 61.4
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 8.5e-105 384.8 321 63.2
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 1.1e-104 384.4 338 62.7
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 5.5e-104 382.1 325 63.1
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 5.5e-104 382.1 353 57.5
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 3.6e-103 379.4 272 70.2
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 6.1e-103 378.6 332 61.7
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 6.1e-103 378.6 338 60.9
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 3.0e-102 376.3 334 62.0
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 8.8e-102 374.8 337 60.5
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.5e-101 374.0 333 60.7
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 1.5e-101 374.0 342 59.6
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 1.8e-99 367.1 324 59.3
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 2.4e-99 366.7 351 57.3
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 5.3e-99 365.5 348 57.5
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 5.3e-99 365.5 349 56.4
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 9.1e-99 364.8 358 55.6
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 1.6e-98 364.0 347 58.5
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 2.0e-98 363.6 328 60.1
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 2.0e-98 363.6 329 61.7
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 2.7e-98 363.2 344 57.6
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 3.5e-98 362.8 333 60.7
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 1.9e-96 357.1 333 55.9
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 4.2e-96 355.9 348 55.5
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 9.4e-96 354.8 343 55.1
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 2.1e-95 353.6 332 58.7
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.7e-95 353.2 374 54.5
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 6.1e-95 352.1 328 58.5
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 8.0e-95 351.7 343 54.2
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 1.8e-94 350.5 343 56.6
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 1.5e-93 347.4 343 57.4
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.5e-93 347.4 387 51.2
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.5e-93 347.4 387 51.2
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 2.6e-93 346.7 376 51.6
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 1.7e-92 344.0 345 55.7
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.1e-91 341.3 343 54.5
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 1.8e-91 340.5 337 56.1
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 7.0e-91 338.6 341 56.0
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 9.1e-91 338.2 330 57.3
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 2.5e-88 330.1 335 53.4
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 7.2e-88 328.6 338 53.6
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 3.6e-87 326.2 342 56.4
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 4.7e-87 325.9 324 54.9
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 6.1e-87 325.5 341 56.6
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.0e-86 322.8 349 53.0
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 1.3e-84 317.8 335 54.3
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 3.1e-83 313.2 326 55.2
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 4.1e-83 312.8 325 52.6
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 2.7e-82 310.1 321 51.7
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 3.5e-82 309.7 331 51.7
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.3e-81 307.8 327 53.8
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.2e-77 294.7 348 49.7
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 7.5e-77 292.0 355 45.9
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 4.6e-74 282.7 342 48.0
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 4.7e-71 272.7 188 68.1
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.5e-69 267.7 190 66.8
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 4.4e-69 266.2 323 46.4
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 9.8e-69 265.0 295 51.5
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 1.7e-68 264.2 206 61.2
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 1.5e-64 251.1 342 44.4
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 6.8e-62 242.3 340 42.4
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 2.6e-61 240.4 320 43.8
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 4.4e-61 239.6 238 57.1
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 4.9e-60 236.1 310 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 6.4e-60 235.7 332 39.8
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 6.4e-60 235.7 322 45.7
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 6.2e-55 219.2 364 37.1
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.4e-51 208.0 189 54.5
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 5.4e-51 206.1 310 46.8
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.2e-50 204.9 132 70.5
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 6.0e-50 202.6 333 40.5
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 6.9e-46 189.1 204 54.4
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 4.2e-43 179.9 124 65.3
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 4.3e-40 169.9 349 31.8
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 7.6e-37 159.1 319 36.1
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 1.2e-34 151.8 147 64.6
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 4.6e-34 149.8 344 31.7
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.6e-31 141.4 259 39.8
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 8.1e-31 139.0 143 47.6
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 6.4e-28 129.4 138 57.2
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 2.7e-26 124.0 86 68.6
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 7.4e-24 115.9 82 67.1
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 4.8e-23 113.2 78 65.4
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.0e-20 105.5 102 58.8
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 3.0e-17 94.0 88 53.4
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 2.2e-15 87.8 132 33.3
BcaC01g00330 Brassica carinata HOM05D005879 ORTHO05D007432 9.0e-14 82.4 144 45.1
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 2.0e-13 81.3 133 39.8
Medtr1g108500 Medicago truncatula HOM05D011368 ORTHO05D000135 7.2e-11 72.8 163 31.3
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 8.8e-09 65.9 58 56.9
MCO14G569 Micromonas commoda HOM05D033910 ORTHO05D034414 6.9e-06 56.2 204 21.6


User provided reference genes

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