Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 0.0e+00 1192.9 573 100.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 3.0e-262 908.3 555 76.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 8.7e-262 906.7 535 78.3
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.4e-259 899.4 532 77.6
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.4e-259 898.7 559 75.7
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.2e-258 896.3 573 73.1
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 7.7e-258 893.6 571 74.8
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 2.2e-257 892.1 544 77.4
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.1e-256 889.8 536 76.7
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.2e-256 887.9 560 75.4
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 9.4e-256 886.7 560 75.2
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.6e-255 885.9 536 76.3
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.0e-254 883.2 558 74.2
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 1.4e-254 882.9 532 75.2
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.3e-254 882.1 562 74.7
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 8.8e-254 880.2 533 76.0
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 8.8e-254 880.2 556 75.0
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.6e-253 878.6 561 73.3
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 2.6e-253 878.6 556 73.6
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 5.7e-253 877.5 556 73.6
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.2e-252 875.5 557 74.0
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 3.7e-252 874.8 563 73.0
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.7e-252 874.8 534 75.1
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 3.7e-252 874.8 534 74.5
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.1e-251 873.2 534 75.3
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.4e-251 872.8 534 74.5
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.8e-251 872.5 558 72.9
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 3.1e-251 871.7 563 73.2
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 4.1e-251 871.3 542 75.3
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 9.1e-251 870.2 549 73.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.5e-250 869.4 536 75.4
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 3.4e-250 868.2 556 72.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 5.9e-250 867.5 542 74.0
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.7e-249 865.9 572 70.3
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 2.2e-249 865.5 551 73.3
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 2.2e-249 865.5 534 74.5
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 5.0e-249 864.4 540 74.1
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 5.0e-249 864.4 555 73.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.2e-248 861.3 561 70.9
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 4.7e-247 857.8 541 73.8
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.0e-246 856.7 545 73.0
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 3.9e-246 854.7 540 73.3
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 7.4e-245 850.5 534 74.0
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 9.7e-245 850.1 547 72.8
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 8.2e-244 847.0 547 72.0
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.1e-243 846.7 545 72.1
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.1e-243 846.7 536 73.3
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.8e-243 845.9 547 72.8
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.6e-242 842.8 537 72.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.6e-242 842.0 529 74.5
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.6e-242 842.0 537 72.1
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.5e-242 841.3 543 73.8
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 7.7e-242 840.5 555 70.6
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 7.7e-242 840.5 552 71.4
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.2e-241 839.0 545 71.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 9.4e-240 833.6 543 72.9
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.7e-239 831.2 531 73.1
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 6.1e-239 830.9 542 71.8
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 2.3e-238 828.9 555 70.3
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 3.3e-237 825.1 534 72.1
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.7e-236 822.8 555 69.5
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 2.8e-236 822.0 558 68.8
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.7e-236 821.6 555 70.1
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.8e-235 819.3 556 69.2
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 3.1e-235 818.5 555 69.9
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.2e-234 816.6 533 73.4
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-234 816.6 555 69.7
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.6e-234 816.2 555 69.7
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.7e-234 815.5 555 69.4
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.1e-231 805.8 550 70.7
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.0e-230 803.5 555 68.1
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.8e-230 802.7 545 69.4
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.3e-230 802.4 538 70.8
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.2e-230 801.2 555 68.1
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 3.1e-227 792.0 553 70.2
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 2.1e-223 779.2 559 68.5
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.0e-222 776.9 535 69.2
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.3e-222 775.8 561 67.9
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 2.3e-222 775.8 539 69.6
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 8.8e-222 773.9 539 68.3
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.5e-221 773.1 565 68.3
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 5.7e-221 771.2 540 68.9
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 4.9e-220 768.1 566 68.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 4.9e-220 768.1 566 68.0
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.1e-219 765.4 564 67.7
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 2.7e-218 762.3 549 65.9
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 4.3e-216 755.0 544 67.6
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 8.3e-212 740.7 561 66.5
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.2e-204 716.1 560 62.0
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.2e-199 700.3 556 62.9
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.1e-198 697.2 551 61.0
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 5.4e-195 684.9 529 63.3
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 6.0e-194 681.4 529 62.0
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.6e-183 646.7 472 65.3
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.9e-171 606.7 565 56.5
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 6.7e-169 598.2 545 55.8
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 2.2e-164 583.2 532 55.5
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.0e-156 557.8 550 52.0
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.6e-154 548.9 542 50.9
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 7.9e-154 548.1 553 52.3
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 2.5e-144 516.5 332 68.7
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 5.5e-123 445.7 463 50.3
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 2.5e-99 367.1 212 78.3
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 4.9e-79 299.7 209 69.4
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.1e-74 284.3 167 77.8
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.3e-68 265.0 196 59.7
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 7.8e-61 239.2 223 56.5
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 3.7e-42 177.2 127 59.1
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.8e-28 131.7 64 89.1
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 6.3e-26 123.2 101 55.4
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 6.9e-25 119.8 65 78.5
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 2.0e-24 118.2 56 100.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.2e-23 114.8 80 63.8
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 3.3e-19 100.9 85 63.5
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.8e-12 78.6 132 39.4
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.6e-11 74.7 42 71.4
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 1.9e-06 58.5 68 51.5


User provided reference genes

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