Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc60.73 Carica papaya HOM05D030452 ORTHO05D000016 7.3e-62 240.4 118 100.0
Cpa.g.sc82.72 Carica papaya HOM05D000014 ORTHO05D000016 1.1e-30 136.7 104 72.1
Cpa.g.sc4.33 Carica papaya HOM05D000014 ORTHO05D000016 9.0e-20 100.5 79 64.6
Cpa.g.sc1265.1 Carica papaya HOM05D000014 ORTHO05D000016 1.9e-17 92.8 67 70.1
Medtr1058s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 7.1e-17 90.9 136 39.7
Cpa.g.sc61.8 Carica papaya HOM05D008054 ORTHO05D000016 9.3e-17 90.5 72 61.1
CANSAT21G1138 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-16 87.8 108 43.5
CANSAT01G2243 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-15 85.1 102 44.1
Cpa.g.sc288.4 Carica papaya HOM05D000014 ORTHO05D000016 3.9e-15 85.1 158 42.4
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-14 83.2 75 52.0
Cpa.g.sc4.147 Carica papaya HOM05D000014 ORTHO05D000016 1.5e-14 83.2 69 55.1
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 1.6e-13 79.7 81 46.9
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-13 79.3 75 48.0
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-13 79.0 80 48.8
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-13 79.0 80 48.8
CANSAT01G0105 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-12 77.0 74 48.6
Medtr0042s0120 Medicago truncatula HOM05D008054 ORTHO05D010196 3.1e-12 75.5 127 37.8
Oeu059601.1 Olea europaea HOM05D000014 ORTHO05D000016 3.1e-12 75.5 134 34.3
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 4.0e-12 75.1 80 46.2
CANSAT54G2409 Cannabis sativa HOM05D000014 ORTHO05D000016 5.3e-12 74.7 131 31.3
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 1.2e-11 73.6 68 54.4
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-11 73.2 80 46.2
CANSAT11G2047 Cannabis sativa HOM05D000014 ORTHO05D000016 2.0e-11 72.8 131 35.9
Oeu047983.1 Olea europaea HOM05D000014 ORTHO05D000016 2.6e-11 72.4 75 45.3
Thecc.01G254100 Theobroma cacao HOM05D000014 ORTHO05D000016 2.6e-11 72.4 60 55.0
AUR62014202 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.4e-11 72.0 56 62.5
AUR62031272 Chenopodium quinoa HOM05D000014 ORTHO05D000016 3.4e-11 72.0 68 51.5
Cpa.g.sc0.8 Carica papaya HOM05D000014 ORTHO05D000016 5.8e-11 71.2 90 43.3
AUR62036886 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.9e-11 70.5 192 29.7
AUR62026440 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.3e-10 70.1 115 38.3
Medtr2g043690 Medicago truncatula HOM05D008054 ORTHO05D010196 1.3e-10 70.1 122 35.2
CANSAT11G1067 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-10 69.7 68 50.0
Thecc.06G051900 Theobroma cacao HOM05D000014 ORTHO05D000016 1.7e-10 69.7 54 61.1
AUR62031796 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.2e-10 69.3 115 38.3
Atru.chr2.557 Acer truncatum HOM05D000014 ORTHO05D000016 3.8e-10 68.6 71 46.5
AUR62039888 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.9e-10 68.2 71 49.3
AUR62039883 Chenopodium quinoa HOM05D000014 ORTHO05D000016 6.4e-10 67.8 71 49.3
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 6.4e-10 67.8 74 44.6
Cpa.g.sc335.1 Carica papaya HOM05D012829 ORTHO05D000016 8.4e-10 67.4 57 64.9
Oeu012344.1 Olea europaea HOM05D000014 ORTHO05D000016 8.4e-10 67.4 75 42.7
AUR62041101 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.1e-09 67.0 67 49.3
arahy.Tifrunner.gnm1.ann1.LBDF62 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.4e-09 66.6 66 43.9
Oeu054243.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-09 66.6 81 40.7
arahy.Tifrunner.gnm1.ann1.2H52CR Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 161 27.3
arahy.Tifrunner.gnm1.ann1.EQB169 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 66 43.9
arahy.Tifrunner.gnm1.ann1.I9FKSU Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 66 43.9
arahy.Tifrunner.gnm1.ann1.LW0R14 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 66 43.9
arahy.Tifrunner.gnm1.ann1.X5U67K Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 66 43.9
arahy.Tifrunner.gnm1.ann1.YYP60T Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-09 66.2 66 43.9
Oeu009768.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-09 65.5 75 41.3
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-09 65.5 212 25.0
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-09 65.5 65 46.2
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-09 65.5 65 46.2
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 3.2e-09 65.5 65 46.2
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 3.2e-09 65.5 65 46.2
arahy.Tifrunner.gnm1.ann1.81QANW Arachis hypogaea HOM05D000014 ORTHO05D000016 4.2e-09 65.1 54 50.0
Cpa.g.sc68.3 Carica papaya HOM05D000014 ORTHO05D000016 4.2e-09 65.1 42 78.6
AUR62022087 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.2e-09 65.1 97 38.1
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-09 65.1 212 25.0
arahy.Tifrunner.gnm1.ann1.9TN888 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.5e-09 64.7 66 42.4
Cpa.g.sc0.183 Carica papaya HOM05D000014 ORTHO05D000016 5.5e-09 64.7 42 76.2
Manes.04G127160 Manihot esculenta HOM05D000014 ORTHO05D000016 5.5e-09 64.7 66 51.5
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 5.5e-09 64.7 212 25.9
Medtr0012s0240 Medicago truncatula HOM05D008054 ORTHO05D000016 7.1e-09 64.3 70 45.7
AUR62035174 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.3e-09 63.9 96 38.5
Oeu039483.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-08 63.5 73 45.2
arahy.Tifrunner.gnm1.ann1.Q96CMM Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-08 63.2 77 39.0
arahy.Tifrunner.gnm1.ann1.TNV6EF Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-08 63.2 66 42.4
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 2.1e-08 62.8 187 27.3
Oeu050542.1 Olea europaea HOM05D000014 ORTHO05D000016 2.1e-08 62.8 178 27.5
arahy.Tifrunner.gnm1.ann1.J83EUV Arachis hypogaea HOM05D000014 ORTHO05D000016 2.7e-08 62.4 54 50.0
Medtr0029s0220 Medicago truncatula HOM05D029435 ORTHO05D000016 2.7e-08 62.4 68 42.6
Atru.chr2.2726 Acer truncatum HOM05D000014 ORTHO05D000016 3.5e-08 62.0 88 37.5
Cpa.g.sc1742.1 Carica papaya HOM05D000014 ORTHO05D000016 3.5e-08 62.0 75 48.0
arahy.Tifrunner.gnm1.ann1.V7ESBJ Arachis hypogaea HOM05D000014 ORTHO05D000016 4.6e-08 61.6 54 50.0
Oeu034030.1 Olea europaea HOM05D000014 ORTHO05D000016 4.6e-08 61.6 75 41.3
arahy.Tifrunner.gnm1.ann1.N0JK03 Arachis hypogaea HOM05D000014 ORTHO05D000016 6.0e-08 61.2 66 40.9
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 6.0e-08 61.2 73 37.0
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 6.0e-08 61.2 57 47.4
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 6.0e-08 61.2 65 44.6
Medtr0060s0110 Medicago truncatula HOM05D008802 ORTHO05D000016 7.9e-08 60.8 70 42.9
Oeu064136.1 Olea europaea HOM05D000014 ORTHO05D000016 7.9e-08 60.8 75 41.3
Oeu017422.1 Olea europaea HOM05D000014 ORTHO05D000016 1.0e-07 60.5 65 47.7
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-07 60.1 65 43.1
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-07 59.7 56 44.6
Manes.07G015250 Manihot esculenta HOM05D000014 ORTHO05D000016 1.8e-07 59.7 62 45.2
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 3.0e-07 58.9 72 38.9
Manes.07G068316 Manihot esculenta HOM05D000014 ORTHO05D000016 3.0e-07 58.9 68 47.1
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-07 58.5 56 44.6
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-07 58.5 56 44.6
Cpa.g.sc274.4 Carica papaya HOM05D000014 ORTHO05D000016 3.9e-07 58.5 42 69.0
arahy.Tifrunner.gnm1.ann1.WHF8H5 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.1e-07 58.2 54 46.3
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 5.1e-07 58.2 56 44.6
ClCG05G013100 Citrullus lanatus HOM05D000014 ORTHO05D000093 5.1e-07 58.2 68 38.2
Medtr0001s0700 Medicago truncatula HOM05D008054 ORTHO05D000016 5.1e-07 58.2 66 43.9
Oeu055875.1 Olea europaea HOM05D000014 ORTHO05D000016 5.1e-07 58.2 75 40.0
arahy.Tifrunner.gnm1.ann1.6CK6EB Arachis hypogaea HOM05D000014 ORTHO05D000016 6.7e-07 57.8 54 42.6
arahy.Tifrunner.gnm1.ann1.B12FQA Arachis hypogaea HOM05D000014 ORTHO05D000016 6.7e-07 57.8 54 42.6
arahy.Tifrunner.gnm1.ann1.CUPE1C Arachis hypogaea HOM05D000014 ORTHO05D000016 6.7e-07 57.8 54 42.6
CANSAT01G1712 Cannabis sativa HOM05D000014 ORTHO05D000016 6.7e-07 57.8 131 27.5
Manes.17G100851 Manihot esculenta HOM05D000014 ORTHO05D000016 6.7e-07 57.8 74 44.6
Medtr1g050915 Medicago truncatula HOM05D008054 ORTHO05D010196 6.7e-07 57.8 56 48.2
Cpa.g.sc61.7 Carica papaya HOM05D000014 ORTHO05D000016 8.7e-07 57.4 77 42.9
Manes.04G047409 Manihot esculenta HOM05D000014 ORTHO05D000016 8.7e-07 57.4 84 35.7
Medtr0091s0050 Medicago truncatula HOM05D008054 ORTHO05D000016 8.7e-07 57.4 66 42.4
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-06 57.0 62 40.3
Medtr0053s0040 Medicago truncatula HOM05D008054 ORTHO05D000016 2.5e-06 55.8 77 40.3
Cpa.g.sc4.92 Carica papaya HOM05D000014 ORTHO05D000016 3.3e-06 55.5 39 71.8
Medtr3g044803 Medicago truncatula HOM05D029435 ORTHO05D000016 3.3e-06 55.5 60 45.0
Gohir.D01G138850 Gossypium hirsutum HOM05D030452 ORTHO05D036317 4.3e-06 55.1 82 35.4
Medtr8g028605 Medicago truncatula HOM05D000014 ORTHO05D000016 5.6e-06 54.7 48 58.3
arahy.Tifrunner.gnm1.ann1.Q1F4QQ Arachis hypogaea HOM05D000014 ORTHO05D000016 7.4e-06 54.3 167 24.6
ClCG10G006240 Citrullus lanatus HOM05D000014 ORTHO05D000016 7.4e-06 54.3 68 36.8
Manes.03G073016 Manihot esculenta HOM05D000014 ORTHO05D000016 9.6e-06 53.9 73 39.7


User provided reference genes

Program Settings