Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 3.6e-175 618.2 335 100.0
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 1.6e-117 426.8 371 67.1
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 4.5e-117 425.2 371 66.8
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 2.9e-116 422.5 371 66.8
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 2.9e-116 422.5 371 66.8
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 5.0e-116 421.8 371 66.6
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 5.0e-116 421.8 371 66.6
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 6.5e-116 421.4 371 66.6
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 6.5e-116 421.4 371 66.6
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 8.5e-116 421.0 371 66.6
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 1.5e-115 420.2 371 66.6
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.9e-115 419.9 371 66.3
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 1.9e-115 419.9 371 66.6
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 2.5e-115 419.5 371 66.3
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 4.2e-115 418.7 371 66.0
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 5.5e-115 418.3 369 67.8
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 5.5e-115 418.3 371 66.0
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 5.5e-115 418.3 369 66.7
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 9.4e-115 417.5 371 65.8
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 4.7e-114 415.2 370 66.2
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 1.4e-113 413.7 367 65.7
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 2.6e-112 409.5 371 65.2
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 9.7e-112 407.5 368 66.0
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 9.7e-112 407.5 373 65.1
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 9.7e-112 407.5 368 65.8
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 9.7e-112 407.5 368 65.8
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 6.3e-111 404.8 371 65.0
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 8.2e-111 404.4 369 65.6
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 8.2e-111 404.4 368 65.5
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 8.2e-111 404.4 369 65.0
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 5.0e-108 395.2 374 62.8
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.5e-107 393.7 371 62.8
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 3.2e-107 392.5 284 77.1
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 4.2e-107 392.1 372 62.1
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 9.4e-107 391.0 367 64.0
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 9.4e-107 391.0 363 64.5
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 1.4e-105 387.1 375 62.4
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 1.8e-105 386.7 378 60.6
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 3.4e-104 382.5 360 64.2
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 7.5e-104 381.3 345 66.4
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 1.7e-103 380.2 375 61.1
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.7e-103 380.2 339 67.6
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 2.8e-103 379.4 366 63.1
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 2.8e-103 379.4 375 62.1
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 4.8e-103 378.6 337 67.7
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.3e-103 377.9 369 62.6
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-102 377.5 366 62.6
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 1.4e-102 377.1 368 63.3
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 2.4e-102 376.3 369 62.1
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 5.4e-102 375.2 368 62.0
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 5.4e-102 375.2 321 67.3
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 7.0e-102 374.8 371 62.0
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 1.2e-101 374.0 369 62.3
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 1.6e-101 373.6 323 66.6
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.6e-101 373.6 362 62.7
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 2.0e-101 373.2 367 62.7
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 3.5e-101 372.5 376 63.3
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 7.7e-101 371.3 366 62.8
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 7.7e-101 371.3 369 61.8
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 1.0e-100 370.9 320 68.1
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 2.3e-100 369.8 328 65.9
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 2.9e-100 369.4 357 60.8
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 3.8e-100 369.0 360 61.9
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 3.8e-100 369.0 373 62.2
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 3.8e-100 369.0 338 65.7
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 5.0e-100 368.6 379 61.5
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 1.1e-99 367.5 346 63.6
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 1.5e-99 367.1 354 63.6
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 3.2e-99 365.9 321 67.3
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 4.2e-99 365.5 359 60.7
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 4.2e-99 365.5 369 61.2
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 5.5e-99 365.2 359 61.0
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 7.2e-99 364.8 337 65.3
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 7.2e-99 364.8 375 61.1
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 9.5e-99 364.4 378 61.6
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 1.2e-98 364.0 353 62.9
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 1.2e-98 364.0 362 61.3
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 2.1e-98 363.2 366 60.9
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 2.8e-98 362.8 287 73.2
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 2.8e-98 362.8 353 62.3
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 4.7e-98 362.1 336 65.2
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 6.1e-98 361.7 322 65.5
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 8.0e-98 361.3 351 63.2
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 1.0e-97 360.9 368 61.1
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 1.0e-97 360.9 362 60.8
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 1.4e-97 360.5 375 61.9
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 1.8e-97 360.1 368 60.9
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 3.0e-97 359.4 354 61.3
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 2.0e-96 356.7 342 63.7
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 2.0e-96 356.7 354 60.5
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 4.4e-96 355.5 361 60.9
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 4.4e-96 355.5 373 60.6
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 5.7e-96 355.1 322 66.5
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 9.8e-96 354.4 375 57.3
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 1.3e-95 354.0 378 59.0
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 1.7e-95 353.6 376 59.6
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 6.3e-95 351.7 348 61.8
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 6.3e-95 351.7 373 59.0
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 8.3e-95 351.3 364 59.3
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.1e-94 350.9 370 60.5
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 2.4e-94 349.7 367 54.5
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 2.4e-94 349.7 345 62.0
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 3.1e-94 349.4 379 59.4
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 4.1e-94 349.0 371 59.3
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 7.0e-94 348.2 291 70.8
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 2.0e-93 346.7 365 59.2
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 5.9e-93 345.1 363 58.1
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.7e-92 343.6 364 57.4
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 1.7e-92 343.6 376 57.4
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 2.3e-92 343.2 369 56.9
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 5.0e-92 342.0 345 61.4
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 4.3e-91 339.0 371 55.8
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 9.5e-91 337.8 371 55.8
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 2.8e-90 336.3 371 55.5
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 3.6e-90 335.9 323 61.3
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 4.9e-87 325.5 370 55.7
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.4e-86 323.2 376 54.3
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 3.4e-80 302.8 357 53.8
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 1.7e-79 300.4 379 50.1
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 3.2e-78 296.2 328 55.8
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 1.8e-73 280.4 369 52.0
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 2.0e-72 276.9 328 53.0
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 3.4e-72 276.2 346 51.7
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.9e-71 273.1 346 52.9
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.4e-70 270.8 329 50.8
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 7.3e-67 258.5 345 48.4
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.0e-65 252.7 231 58.9
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 1.5e-64 250.8 241 64.7
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 6.0e-61 238.8 247 60.7
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.3e-60 237.7 224 54.9
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 8.7e-60 235.0 339 46.3
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 2.4e-57 226.9 320 45.6
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 2.0e-56 223.8 206 60.7
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 2.6e-56 223.4 302 51.0
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.5e-53 213.0 239 53.6
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 7.1e-46 188.7 142 66.9
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.1e-41 173.3 123 70.7
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 6.2e-34 149.1 99 75.8
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 1.3e-31 141.4 95 76.8
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 2.9e-31 140.2 158 54.4
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.8e-26 123.6 125 52.0
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 2.8e-26 123.6 85 70.6
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 2.4e-25 120.6 95 64.2
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 1.4e-20 104.8 67 76.1
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.8e-20 104.4 112 51.8
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 3.3e-19 100.1 92 58.7
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 4.3e-19 99.8 165 40.6
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 1.3e-18 98.2 100 54.0
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 1.1e-17 95.1 129 46.5
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 2.0e-16 90.9 104 51.0
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 2.1e-13 80.9 130 41.5
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-09 68.6 48 66.7
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 1.8e-09 67.8 44 75.0
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.8e-09 67.8 48 66.7
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 1.8e-09 67.8 225 31.6
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 2.4e-09 67.4 73 54.8
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.4e-09 67.4 53 60.4
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.4e-09 67.4 52 59.6
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.1e-09 66.6 76 51.3
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.1e-09 66.6 76 51.3
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 7.0e-09 65.9 225 28.0
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.6e-08 63.9 48 64.6
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.5e-08 63.2 53 56.6
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.3e-07 61.6 47 59.6
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 2.2e-07 60.8 177 33.3
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-06 58.5 48 58.3
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 2.5e-06 57.4 67 73.1
TAR625G0182 Trochodendron aralioides HOM05D000369 ORTHO05D000253 4.2e-06 56.6 82 47.6


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