Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 5.3e-31 138.7 66 100.0
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 7.9e-11 71.6 57 57.9
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 3.0e-10 69.7 66 51.5
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 1.1e-09 67.8 57 54.4
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 1.5e-09 67.4 66 53.0
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 1.9e-09 67.0 66 50.0
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.5e-09 66.6 66 51.5
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.5e-09 66.6 66 51.5
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.3e-09 66.2 66 51.5
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 4.3e-09 65.9 57 56.1
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.7e-09 65.5 66 51.5
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.6e-08 63.9 62 50.0
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.2e-08 63.5 67 50.7
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.2e-08 63.5 67 47.8
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 4.8e-08 62.4 57 50.9
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 6.3e-08 62.0 68 50.0
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 8.2e-08 61.6 65 50.8
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.4e-07 60.8 66 48.5
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 1.4e-07 60.8 57 49.1
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 1.8e-07 60.5 62 50.0
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.4e-07 60.1 66 48.5
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 3.1e-07 59.7 57 56.1
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 4.1e-07 59.3 68 44.1
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 9.0e-07 58.2 64 50.0
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.2e-06 57.8 66 47.0
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.0e-06 57.0 66 47.0
FAN28G1184 Fragaria x ananassa HOM05D014781 ORTHO05D009841 2.0e-06 57.0 63 42.9
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 2.0e-06 57.0 66 50.0
FAN28G2323 Fragaria x ananassa HOM05D014781 ORTHO05D009841 2.6e-06 56.6 63 42.9
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 2.6e-06 56.6 61 50.8
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 5.9e-06 55.5 68 42.6
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 5.9e-06 55.5 59 45.8
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 7.7e-06 55.1 61 44.3
CSS0026698 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 1.0e-05 54.7 62 46.8
FvH4_1g16830 Fragaria vesca HOM05D014781 ORTHO05D009841 1.0e-05 54.7 61 42.6
FAN19G0512 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.0e-05 54.7 61 42.6
FAN26G0261 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.0e-05 54.7 61 42.6
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 1.0e-05 54.7 56 50.0


User provided reference genes

Program Settings