Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.346 Carica papaya HOM05D001516 ORTHO05D001357 1.0e-131 473.4 235 100.0
Gorai.003G002500 Gossypium raimondii HOM05D001516 ORTHO05D001357 1.0e-43 181.0 184 53.3
Gohir.A02G177600 Gossypium hirsutum HOM05D001516 ORTHO05D001357 1.4e-43 180.6 182 53.8
Gohir.D03G002200 Gossypium hirsutum HOM05D001516 ORTHO05D001357 1.4e-43 180.6 184 53.3
FAN19G0893 Fragaria x ananassa HOM05D001516 ORTHO05D001357 3.1e-40 169.5 183 49.7
FvH4_1g10460 Fragaria vesca HOM05D001516 ORTHO05D001357 5.3e-40 168.7 183 49.7
MD15G1232500 Malus domestica HOM05D001516 ORTHO05D001357 7.0e-40 168.3 184 46.7
CiPaw.07G003300 Carya illinoinensis HOM05D001516 ORTHO05D001357 2.0e-39 166.8 184 49.5
Potri.005G101000 Populus trichocarpa HOM05D001516 ORTHO05D001357 3.5e-39 166.0 182 47.3
FAN23G2806 Fragaria x ananassa HOM05D001516 ORTHO05D001357 2.2e-38 163.3 182 47.8
MD02G1117800 Malus domestica HOM05D001516 ORTHO05D001357 2.9e-38 162.9 184 46.2
QL06p052912 Quercus lobata HOM05D001516 ORTHO05D001357 2.9e-38 162.9 184 48.4
FAN26G0778 Fragaria x ananassa HOM05D001516 ORTHO05D001357 3.2e-37 159.5 183 48.6
RcHm_v2.0_Chr2g0097321 Rosa chinensis HOM05D001516 ORTHO05D001357 4.2e-37 159.1 184 50.0
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 3.0e-35 152.9 169 52.1
Manes.02G113900 Manihot esculenta HOM05D001516 ORTHO05D001357 8.8e-35 151.4 134 59.0
FAN28G1915 Fragaria x ananassa HOM05D001516 ORTHO05D001357 2.6e-34 149.8 199 43.2
Atru.chr4.1891 Acer truncatum HOM05D001516 ORTHO05D001357 2.8e-33 146.4 181 46.4
Prupe.7G181600 Prunus persica HOM05D001516 ORTHO05D001357 3.7e-33 146.0 180 45.0
Glyma.01G159200 Glycine max HOM05D001516 ORTHO05D001357 5.9e-31 138.7 181 43.1
Dinv40181 Davidia involucrata HOM05D001516 ORTHO05D001357 2.2e-30 136.7 187 42.8
Dinv08169 Davidia involucrata HOM05D001516 ORTHO05D001357 1.1e-29 134.4 185 44.9
Glyma.11G085500 Glycine max HOM05D001516 ORTHO05D001357 1.9e-29 133.7 183 42.1
Aqoxy6G01631 Aquilegia oxysepala HOM05D001516 ORTHO05D001357 3.2e-29 132.9 178 44.4
Lalb_Chr16g0391621 Lupinus albus HOM05D001516 ORTHO05D001357 5.5e-29 132.1 184 40.8
CSS0038680 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 9.5e-29 131.3 175 45.7
Ciclev10027531m.g Citrus clementina HOM05D001516 ORTHO05D001357 1.6e-28 130.6 152 48.7
VMungo1215G1384 Vigna mungo HOM05D001516 ORTHO05D001357 1.6e-28 130.6 181 41.4
Phvul.002G116000 Phaseolus vulgaris HOM05D001516 ORTHO05D001357 2.7e-28 129.8 184 42.4
Sabra05G0083500 Salix brachista HOM05D001516 ORTHO05D001357 6.1e-28 128.6 199 40.2
Actinidia28746 Actinidia chinensis HOM05D002491 ORTHO05D002651 1.8e-27 127.1 164 48.2
Medtr5g024070 Medicago truncatula HOM05D001516 ORTHO05D001357 2.3e-27 126.7 182 41.2
Thecc.01G006000 Theobroma cacao HOM05D001516 ORTHO05D001357 6.8e-27 125.2 136 50.7
TPR.G8368 Trifolium pratense HOM05D001516 ORTHO05D001357 6.8e-27 125.2 167 43.7
arahy.Tifrunner.gnm1.ann1.JXS3UT Arachis hypogaea HOM05D001516 ORTHO05D001357 7.5e-26 121.7 171 42.1
CARHR243930 Cardamine hirsuta HOM05D001516 ORTHO05D001357 9.8e-26 121.3 197 39.6
arahy.Tifrunner.gnm1.ann1.G1MIMQ Arachis hypogaea HOM05D001516 ORTHO05D001357 1.3e-25 120.9 171 42.1
CANSAT25G2192 Cannabis sativa HOM05D001516 ORTHO05D001357 1.3e-25 120.9 168 44.6
Lj2g0007675 Lotus japonicus HOM05D001516 ORTHO05D001357 4.9e-25 119.0 226 38.1
BcaNung03642 Brassica carinata HOM05D001516 ORTHO05D001357 1.4e-24 117.5 188 39.4
Lj2A499G36 Lonicera japonica HOM05D001516 ORTHO05D001357 1.8e-24 117.1 187 44.4
BcaNung00579 Brassica carinata HOM05D001516 ORTHO05D001357 3.1e-24 116.3 189 39.7
C01p03390 Brassica napus HOM05D001516 ORTHO05D001357 3.1e-24 116.3 189 39.7
BolC1t00324H Brassica oleracea HOM05D001516 ORTHO05D001357 3.1e-24 116.3 189 39.7
Psat2g149160 Pisum sativum HOM05D001516 ORTHO05D001357 5.4e-24 115.5 184 41.8
arahy.Tifrunner.gnm1.ann1.F3ZCPW Arachis hypogaea HOM05D001516 ORTHO05D001357 7.0e-24 115.2 174 41.4
arahy.Tifrunner.gnm1.ann1.ZR07MJ Arachis hypogaea HOM05D001516 ORTHO05D001357 7.0e-24 115.2 174 41.4
AL7G15560 Arabidopsis lyrata HOM05D001516 ORTHO05D001357 4.5e-23 112.5 183 36.1
AT4G35590 Arabidopsis thaliana HOM05D001516 ORTHO05D001357 4.5e-23 112.5 172 36.6
Lsat_1_v5_gn_2_73400 Lactuca sativa HOM05D001516 ORTHO05D001357 5.9e-23 112.1 186 39.8
Aa31LG6G12560 Aethionema arabicum HOM05D001516 ORTHO05D001357 7.7e-23 111.7 159 39.6
Thhalv10027037m.g Eutrema salsugineum HOM05D001516 ORTHO05D001357 1.0e-22 111.3 197 37.6
vmacro18462 Vaccinium macrocarpon HOM05D001516 ORTHO05D001357 1.0e-22 111.3 180 40.0
Sp7g33360 Schrenkiella parvula HOM05D001516 ORTHO05D001357 1.7e-22 110.5 206 35.9
Lalb_Chr09g0321211 Lupinus albus HOM05D001516 ORTHO05D001357 3.8e-22 109.4 190 38.4
BraA01t00286Z Brassica rapa HOM05D001516 ORTHO05D001357 1.5e-21 107.5 182 39.0
ECA238G4466 Erigeron canadensis HOM05D001516 ORTHO05D001357 1.9e-21 107.1 190 38.4
Nitab4.5_0000702g0170 Nicotiana tabacum HOM05D001516 ORTHO05D001357 2.8e-20 103.2 176 38.1
ATR0807G179 Amborella trichopoda HOM05D001516 ORTHO05D001357 6.1e-20 102.1 140 43.6
Atru.chr3.137 Acer truncatum HOM05D001516 ORTHO05D001357 1.0e-19 101.3 173 37.6
A01p03040 Brassica napus HOM05D001516 ORTHO05D001357 1.4e-19 100.9 165 39.4
Nitab4.5_0011694g0020 Nicotiana tabacum HOM05D001516 ORTHO05D001357 2.3e-19 100.1 176 36.9
Cc07_g11770 Coffea canephora HOM05D001516 ORTHO05D001357 1.2e-18 97.8 175 40.0
HanXRQChr09g0258161 Helianthus annuus HOM05D001516 ORTHO05D001357 1.5e-18 97.4 188 35.6
Carub.0007s0471 Capsella rubella HOM05D001516 ORTHO05D001357 3.4e-18 96.3 213 33.8
COL.COLO4_13416 Corchorus olitorius HOM05D001516 ORTHO05D001357 4.4e-18 95.9 307 27.4
CSS0004018 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 5.7e-18 95.5 101 50.5
Nn6g31711 Nelumbo nucifera HOM05D001516 ORTHO05D001357 7.5e-18 95.1 137 40.9
Lj4A234T62 Lonicera japonica HOM05D001516 ORTHO05D001357 1.7e-14 84.0 86 48.8
arahy.Tifrunner.gnm1.ann1.MYS8SE Arachis hypogaea HOM05D001516 ORTHO05D001357 1.1e-13 81.3 98 41.8
BcaNung03643 Brassica carinata HOM05D001516 ORTHO05D001357 1.2e-12 77.8 100 45.0
Ca_24975_v3 Cicer arietinum L. HOM05D001516 ORTHO05D001357 4.4e-10 69.3 107 37.4
AagrBONN_evm.TU.Sc2ySwM_362.436 Anthoceros agrestis HOM05D001516 ORTHO05D001357 8.6e-06 55.1 125 28.8


User provided reference genes

Program Settings