Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 5.5e-86 320.9 154 100.0
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 7.7e-64 247.3 146 76.7
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 2.3e-63 245.7 145 77.9
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 8.6e-63 243.8 146 76.7
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 1.1e-62 243.4 148 75.7
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 4.2e-62 241.5 146 74.7
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 1.2e-61 240.0 146 74.7
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.2e-61 240.0 146 74.0
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.1e-61 239.2 148 73.0
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 2.1e-61 239.2 148 73.0
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 3.6e-61 238.4 146 74.0
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 4.7e-61 238.0 145 73.8
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.0e-60 236.9 148 72.3
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 3.0e-60 235.3 146 71.9
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 8.9e-60 233.8 147 74.1
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 1.5e-59 233.0 146 71.9
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.5e-59 233.0 145 73.8
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 4.4e-59 231.5 146 73.3
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 5.7e-59 231.1 145 71.7
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 7.5e-59 230.7 146 72.6
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 4.9e-58 228.0 146 69.9
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 4.9e-58 228.0 146 71.2
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 6.3e-58 227.6 146 71.2
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 8.3e-58 227.3 146 71.9
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 8.3e-58 227.3 146 69.9
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 1.1e-57 226.9 146 69.2
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 1.1e-57 226.9 146 69.2
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.1e-57 226.9 146 69.2
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 1.1e-57 226.9 146 70.5
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 2.4e-57 225.7 146 69.9
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 3.2e-57 225.3 146 69.9
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 4.1e-57 224.9 146 69.2
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 4.1e-57 224.9 146 68.5
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 4.1e-57 224.9 146 71.2
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 4.1e-57 224.9 146 68.5
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.4e-57 224.6 146 68.5
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 5.4e-57 224.6 146 71.2
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 7.0e-57 224.2 146 67.8
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 9.2e-57 223.8 146 70.5
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 1.6e-56 223.0 146 67.1
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 1.6e-56 223.0 147 68.0
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 1.6e-56 223.0 146 69.9
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 2.0e-56 222.6 146 67.8
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 2.7e-56 222.2 146 69.2
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 2.7e-56 222.2 146 69.2
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 1.3e-55 219.9 146 67.8
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 1.7e-55 219.5 146 67.1
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 1.7e-55 219.5 146 65.8
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 2.3e-55 219.2 146 65.8
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 2.9e-55 218.8 146 66.4
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 2.9e-55 218.8 146 66.4
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.9e-55 218.8 146 67.1
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 5.0e-55 218.0 148 68.2
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 8.6e-55 217.2 146 65.8
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 8.6e-55 217.2 146 67.1
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 3.3e-54 215.3 146 67.8
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 3.3e-54 215.3 146 65.8
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 4.3e-54 214.9 146 68.5
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 7.3e-54 214.2 146 64.4
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 7.3e-54 214.2 146 65.1
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 7.3e-54 214.2 146 65.8
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 7.3e-54 214.2 146 63.7
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 7.3e-54 214.2 146 66.4
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 9.5e-54 213.8 146 66.4
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 9.5e-54 213.8 146 65.8
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 9.5e-54 213.8 146 65.1
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 1.6e-53 213.0 146 65.8
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 2.1e-53 212.6 146 63.7
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.8e-53 212.2 146 64.4
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 2.8e-53 212.2 150 67.3
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 6.1e-53 211.1 146 67.1
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 6.1e-53 211.1 146 67.1
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 1.0e-52 210.3 146 65.8
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 2.3e-52 209.1 146 63.0
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 3.1e-52 208.8 126 73.8
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 5.2e-52 208.0 168 60.1
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 8.9e-52 207.2 146 63.0
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 8.9e-52 207.2 124 72.6
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 3.4e-51 205.3 147 62.6
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 1.3e-50 203.4 147 65.3
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 1.3e-50 203.4 147 65.3
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 1.9e-49 199.5 126 73.0
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 9.2e-49 197.2 148 61.5
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 3.5e-48 195.3 148 59.5
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.0e-47 193.7 134 66.4
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 3.9e-47 191.8 129 63.6
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.9e-46 189.5 134 61.2
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 7.3e-46 187.6 149 61.1
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 1.6e-45 186.4 149 61.1
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 2.8e-45 185.7 146 61.0
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.8e-44 183.0 124 65.3
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 5.2e-44 181.4 153 60.1
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 4.1e-41 171.8 105 70.5
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.0e-39 165.6 149 51.7
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 1.4e-36 156.8 106 66.0
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.3e-36 156.0 106 66.0
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 2.6e-35 152.5 158 46.8
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 2.9e-34 149.1 145 53.8
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 2.9e-34 149.1 172 42.4
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 5.4e-33 144.8 130 50.0
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 7.1e-33 144.4 158 44.3
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.1e-32 142.9 159 44.0
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 2.1e-32 142.9 159 44.0
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 5.6e-30 134.8 156 42.9
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 2.1e-29 132.9 155 40.0
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 6.0e-24 114.8 106 52.8
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 1.7e-23 113.2 64 75.0
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 1.1e-20 104.0 64 65.6
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 1.4e-20 103.6 105 47.6
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 3.0e-15 85.9 100 38.0
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 8.1e-13 77.8 123 34.1
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 1.1e-12 77.4 54 59.3


User provided reference genes

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