Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 2.2e-61 238.8 121 100.0
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 5.6e-17 91.3 67 67.2
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 1.4e-15 86.7 68 66.2
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 4.0e-15 85.1 71 66.2
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 1.5e-14 83.2 67 65.7
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 2.0e-14 82.8 69 62.3
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 4.4e-14 81.6 66 63.6
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 7.5e-14 80.9 62 64.5
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 7.5e-14 80.9 67 62.7
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 9.8e-14 80.5 67 61.2
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 9.8e-14 80.5 74 56.8
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 1.7e-13 79.7 62 62.9
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 2.9e-13 79.0 61 65.6
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 8.3e-13 77.4 59 66.1
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 1.1e-12 77.0 67 59.7
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.1e-12 77.0 49 79.6
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 1.9e-12 76.3 67 61.2
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 2.4e-12 75.9 68 60.3
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 3.2e-12 75.5 48 79.2
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 4.1e-12 75.1 56 64.3
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 5.4e-12 74.7 59 59.3
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 5.4e-12 74.7 61 62.3
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 5.4e-12 74.7 61 57.4
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 9.2e-12 73.9 67 59.7
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 9.2e-12 73.9 49 71.4
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.2e-11 73.6 68 58.8
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.2e-11 73.6 68 58.8
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 1.6e-11 73.2 72 55.6
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 1.6e-11 73.2 53 66.0
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 2.1e-11 72.8 61 59.0
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 3.5e-11 72.0 61 63.9
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 4.6e-11 71.6 67 53.7
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 6.0e-11 71.2 61 60.7
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 7.8e-11 70.9 55 65.5
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 7.8e-11 70.9 63 55.6
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 1.0e-10 70.5 57 59.6
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 1.0e-10 70.5 72 55.6
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 1.3e-10 70.1 48 72.9
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.7e-10 69.7 62 58.1
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 1.7e-10 69.7 61 62.3
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 1.7e-10 69.7 65 53.8
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 1.7e-10 69.7 69 55.1
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.3e-10 69.3 69 55.1
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 2.3e-10 69.3 57 59.6
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 3.0e-10 68.9 61 59.0
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 3.0e-10 68.9 67 56.7
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 3.0e-10 68.9 67 58.2
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 3.0e-10 68.9 69 55.1
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 3.9e-10 68.6 61 55.7
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 5.1e-10 68.2 52 65.4
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 5.1e-10 68.2 66 59.1
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 6.6e-10 67.8 96 44.8
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 8.6e-10 67.4 49 65.3
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 8.6e-10 67.4 68 54.4
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 1.1e-09 67.0 49 63.3
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 1.5e-09 66.6 49 67.3
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 3.3e-09 65.5 47 68.1
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 3.3e-09 65.5 49 67.3
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 4.3e-09 65.1 66 53.0
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 7.3e-09 64.3 52 63.5
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 7.3e-09 64.3 52 63.5
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 1.6e-08 63.2 62 53.2
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 2.1e-08 62.8 59 49.2
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 3.6e-08 62.0 63 47.6
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 6.2e-08 61.2 53 54.7
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 6.2e-08 61.2 62 51.6
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 6.2e-08 61.2 63 49.2
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 6.2e-08 61.2 66 43.9
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 8.1e-08 60.8 65 49.2
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 8.1e-08 60.8 65 49.2
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 1.1e-07 60.5 50 58.0
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 2.3e-07 59.3 67 46.3
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 3.1e-07 58.9 69 40.6
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 3.1e-07 58.9 53 50.9
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 4.0e-07 58.5 61 50.8
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 5.2e-07 58.2 69 49.3
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 5.2e-07 58.2 63 47.6
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 5.2e-07 58.2 49 55.1
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 2.6e-06 55.8 46 58.7
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 2.6e-06 55.8 68 44.1
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 2.6e-06 55.8 68 44.1
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 3.4e-06 55.5 68 44.1
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 5.8e-06 54.7 69 46.4
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 5.8e-06 54.7 59 45.8
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 7.6e-06 54.3 63 44.4
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 9.9e-06 53.9 50 54.0
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 9.9e-06 53.9 68 42.6
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 9.9e-06 53.9 68 42.6


User provided reference genes

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