Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 9.3e-125 450.3 237 100.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.8e-80 303.1 217 77.4
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.0e-79 299.7 212 75.9
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.9e-78 295.8 217 74.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 9.4e-77 290.8 217 74.2
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.7e-76 289.3 214 75.7
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 6.1e-76 288.1 212 75.5
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 6.1e-76 288.1 212 75.5
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.3e-75 286.2 217 76.0
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 3.0e-75 285.8 212 76.4
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.0e-75 285.8 221 71.9
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 5.2e-75 285.0 215 74.0
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.6e-74 282.7 213 74.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 3.3e-74 282.3 220 72.3
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-73 280.0 215 73.0
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.7e-73 280.0 218 74.3
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.4e-72 276.2 234 69.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.6e-71 272.7 214 72.0
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 4.5e-71 271.9 220 70.5
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 5.9e-71 271.6 212 72.6
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.7e-70 270.0 214 68.7
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.9e-70 269.2 216 71.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 5.0e-70 268.5 222 70.3
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.5e-70 268.1 221 70.6
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.1e-69 267.3 212 68.9
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.5e-69 266.2 220 67.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 3.2e-69 265.8 235 67.2
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 4.2e-69 265.4 212 68.4
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 9.4e-69 264.2 213 69.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.2e-68 263.8 151 88.1
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.6e-68 263.5 213 67.1
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.1e-68 263.1 212 68.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.1e-68 263.1 212 67.0
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 3.6e-68 262.3 216 69.9
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 3.6e-68 262.3 215 67.4
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.0e-67 260.8 214 69.2
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.4e-67 260.4 167 80.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.8e-67 260.0 212 69.8
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.8e-67 260.0 228 67.1
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.0e-67 259.2 213 66.2
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 4.0e-67 258.8 150 86.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 5.2e-67 258.5 218 65.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 8.8e-67 257.7 218 66.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.2e-66 257.3 212 65.1
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.2e-66 257.3 212 68.9
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.5e-66 256.9 228 67.1
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.5e-66 256.9 220 65.5
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.0e-66 256.5 212 67.0
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 7.5e-66 254.6 213 67.1
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 2.2e-65 253.1 212 67.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.2e-65 253.1 216 67.6
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.8e-65 252.7 212 68.9
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.1e-64 250.8 214 65.9
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 7.0e-64 248.1 212 64.6
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 9.1e-64 247.7 150 82.0
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.6e-63 246.9 219 64.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.6e-63 246.9 242 62.8
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 7.7e-63 244.6 216 66.7
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.0e-62 244.2 155 78.7
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.7e-62 243.4 184 72.3
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.2e-62 243.0 213 64.8
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 2.9e-62 242.7 172 75.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 3.8e-62 242.3 149 79.9
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 8.5e-62 241.1 190 71.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.5e-62 241.1 136 88.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.9e-61 240.0 214 63.6
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.9e-61 240.0 212 67.5
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.2e-61 238.8 221 65.6
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 9.4e-61 237.7 212 62.7
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 8.0e-60 234.6 153 78.4
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.4e-59 233.8 212 63.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.8e-59 233.4 220 64.5
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.8e-59 233.4 150 81.3
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.3e-59 233.0 150 78.0
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.2e-59 231.9 216 60.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 8.8e-59 231.1 213 62.4
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.6e-58 229.6 217 61.8
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 7.5e-58 228.0 224 59.4
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 9.8e-58 227.6 156 76.3
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.7e-57 226.9 190 65.8
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.3e-57 224.9 212 61.3
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.8e-56 223.4 214 59.8
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.4e-56 223.0 181 72.4
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 9.1e-56 221.1 202 64.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 2.0e-55 219.9 217 62.2
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 5.0e-54 215.3 212 59.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.6e-54 214.5 212 59.9
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.1e-53 214.2 215 60.0
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-53 214.2 128 81.2
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.5e-53 213.8 215 58.6
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.5e-53 213.8 214 58.9
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.5e-53 213.8 214 58.9
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 9.5e-53 211.1 218 59.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.8e-51 206.8 231 54.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 5.7e-50 201.8 231 55.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.3e-49 200.7 208 55.3
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.1e-48 197.6 150 63.3
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.8e-48 196.8 181 56.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.6e-47 193.7 109 89.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 8.6e-46 188.0 108 86.1
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.1e-45 187.6 150 70.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.6e-42 176.4 110 81.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.4e-42 175.6 197 50.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.3e-41 174.1 172 62.2
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 6.0e-39 165.2 162 63.0
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-35 152.9 148 62.8
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.1e-35 152.9 159 58.5
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 5.2e-35 152.1 147 61.9
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.4e-32 144.1 127 60.6
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.1e-29 134.4 72 90.3
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 7.6e-26 121.7 147 40.8
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.3e-21 106.3 68 76.5
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.3e-21 106.3 68 76.5
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 6.2e-20 102.1 102 60.8
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.2e-16 89.4 58 72.4
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 8.7e-14 81.6 52 76.9
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.9e-06 56.2 36 72.2


User provided reference genes

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