Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 8.3e-94 347.1 179 100.0
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 2.4e-77 292.4 172 86.0
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 9.3e-77 290.4 174 85.6
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 1.5e-74 283.1 172 83.7
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.9e-74 282.7 174 81.6
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.6e-73 279.6 167 82.6
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 2.1e-73 279.3 172 82.0
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 3.6e-73 278.5 172 82.6
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 4.8e-73 278.1 174 79.9
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.1e-72 276.9 169 81.7
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.4e-72 276.6 169 80.5
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.8e-72 276.2 167 82.6
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 3.1e-72 275.4 172 81.4
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 5.3e-72 274.6 165 82.4
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 9.0e-72 273.9 167 81.4
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 9.0e-72 273.9 177 79.7
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 9.0e-72 273.9 169 79.3
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.2e-71 273.5 172 79.7
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 4.5e-71 271.6 173 80.3
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.3e-70 270.0 166 80.1
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 4.9e-70 268.1 165 79.4
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 6.4e-70 267.7 173 78.0
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 6.4e-70 267.7 174 77.0
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 8.4e-70 267.3 170 79.4
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 8.4e-70 267.3 168 80.4
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.1e-69 266.9 165 78.8
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.4e-69 266.5 177 75.7
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.4e-69 266.5 163 79.8
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.4e-69 265.8 174 76.4
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 5.4e-69 264.6 171 76.0
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 5.4e-69 264.6 176 78.4
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 5.4e-69 264.6 181 76.2
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 7.1e-69 264.2 174 76.4
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 9.3e-69 263.8 165 77.6
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 9.3e-69 263.8 162 78.4
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.2e-68 263.5 174 74.7
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.2e-68 263.5 160 78.8
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.6e-68 263.1 171 76.6
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 1.6e-68 263.1 178 74.7
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 2.1e-68 262.7 166 76.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 2.7e-68 262.3 158 81.6
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 4.6e-68 261.5 170 77.1
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 4.6e-68 261.5 177 74.0
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 6.0e-68 261.2 170 76.5
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 6.0e-68 261.2 165 78.8
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 7.9e-68 260.8 169 78.7
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 7.9e-68 260.8 163 77.9
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 1.0e-67 260.4 170 76.5
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.3e-67 260.0 179 76.5
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.8e-67 259.6 168 77.4
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.8e-67 259.6 170 76.5
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.0e-67 258.8 176 77.3
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 3.0e-67 258.8 176 73.3
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 3.9e-67 258.5 169 75.1
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 8.7e-67 257.3 178 75.3
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 2.5e-66 255.8 168 76.8
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 2.5e-66 255.8 173 74.0
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 2.5e-66 255.8 167 76.0
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 3.3e-66 255.4 173 74.6
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 4.3e-66 255.0 155 79.4
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 1.3e-65 253.4 155 78.7
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.3e-65 253.4 170 77.6
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.1e-65 252.7 158 77.8
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 3.7e-65 251.9 176 72.7
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 4.8e-65 251.5 166 73.5
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 1.1e-64 250.4 165 75.2
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 1.1e-64 250.4 157 78.3
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 3.1e-64 248.8 173 71.7
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 4.0e-64 248.4 176 72.2
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 5.3e-64 248.1 154 77.9
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 5.3e-64 248.1 168 75.0
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 9.0e-64 247.3 176 71.6
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 9.0e-64 247.3 167 73.1
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 2.0e-63 246.1 172 73.3
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 2.6e-63 245.7 154 77.3
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.6e-63 245.7 159 74.2
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 5.8e-63 244.6 170 72.9
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 7.6e-63 244.2 166 74.1
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 7.6e-63 244.2 159 74.2
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-62 243.4 170 73.5
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.3e-62 243.4 173 69.4
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 3.8e-62 241.9 171 72.5
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 3.8e-62 241.9 203 63.1
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 4.9e-62 241.5 170 72.9
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 6.5e-62 241.1 170 73.5
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 8.4e-62 240.7 167 71.3
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 8.4e-62 240.7 222 61.7
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 1.4e-61 240.0 173 70.5
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.5e-61 239.2 167 74.3
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 2.5e-61 239.2 159 76.1
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 2.5e-61 239.2 170 71.2
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.2e-61 238.4 206 63.6
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 4.2e-61 238.4 154 74.7
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 5.5e-61 238.0 174 69.0
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 2.1e-60 236.1 155 75.5
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 3.5e-60 235.3 167 73.1
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 4.6e-60 235.0 159 73.6
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 4.6e-60 235.0 159 74.2
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 4.6e-60 235.0 164 73.2
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 6.0e-60 234.6 158 75.3
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 7.9e-60 234.2 159 74.2
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 1.3e-59 233.4 158 74.1
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.3e-59 233.4 165 70.3
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 6.7e-59 231.1 165 70.9
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 6.7e-59 231.1 163 69.3
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 8.7e-59 230.7 170 71.8
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.5e-58 229.9 169 71.0
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.9e-58 229.6 162 69.1
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 8.2e-57 224.2 178 67.4
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 1.1e-56 223.8 176 69.3
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.0e-56 221.9 157 70.1
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 9.0e-56 220.7 152 69.1
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.7e-54 216.5 139 77.7
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 8.4e-54 214.2 155 68.4
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 3.2e-53 212.2 151 68.9
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 5.5e-53 211.5 152 69.1
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 3.5e-52 208.8 198 59.1
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 4.6e-52 208.4 131 73.3
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.8e-51 206.5 162 63.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 6.7e-51 204.5 138 70.3
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 3.3e-50 202.2 129 76.7
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 3.3e-50 202.2 170 64.1
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.7e-49 198.7 156 65.4
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.1e-48 197.2 172 60.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 4.1e-48 195.3 120 76.7
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.7e-46 189.9 111 80.2
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.0e-43 180.6 164 59.8
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 5.1e-43 178.3 143 65.0
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 4.3e-42 175.3 116 77.6
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.3e-41 173.7 167 57.5
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 1.8e-40 169.9 174 54.0
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 3.1e-40 169.1 156 55.8
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 1.5e-39 166.8 158 58.9
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 5.9e-39 164.9 105 78.1
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 1.3e-38 163.7 112 74.1
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.4e-37 160.2 164 50.0
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.9e-35 152.1 98 72.4
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 8.8e-35 151.0 106 69.8
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 5.7e-34 148.3 103 73.8
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.9e-29 133.3 93 75.3
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 2.5e-29 132.9 93 74.2
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.2e-29 132.1 84 72.6
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 9.4e-29 131.0 104 67.3
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 2.3e-27 126.3 162 44.4
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 2.2e-22 109.8 88 68.2
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 6.5e-22 108.2 178 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.0e-19 100.9 66 75.8
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 1.0e-19 100.9 74 66.2
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 7.5e-18 94.7 61 72.1
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.7e-17 93.6 59 76.3
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.7e-17 93.6 59 76.3
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 1.7e-17 93.6 115 53.9
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 1.7e-14 83.6 169 32.0
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 2.2e-14 83.2 195 28.7
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 3.8e-14 82.4 61 67.2
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.2e-12 77.4 54 74.1
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 8.0e-12 74.7 45 77.8
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 8.0e-12 74.7 151 34.4
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.6e-07 60.5 46 60.9


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