Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc596.3 Carica papaya HOM05D000596 ORTHO05D004566 3.5e-12 73.6 35 100.0
Cpa.g.sc596.2 Carica papaya HOM05D000596 ORTHO05D004566 1.0e-11 72.0 35 97.1
Manes.17G041800 Manihot esculenta HOM05D000596 ORTHO05D004566 2.1e-09 64.3 35 82.9
Potri.004G037900 Populus trichocarpa HOM05D000596 ORTHO05D004566 4.7e-09 63.2 35 80.0
Hma1.2p1_0191F.1_g083310 Hydrangea macrophylla HOM05D000596 ORTHO05D004566 8.0e-09 62.4 35 80.0
Sabra04G0023000 Salix brachista HOM05D000596 ORTHO05D004566 1.4e-08 61.6 35 80.0
Dinv39778 Davidia involucrata HOM05D000596 ORTHO05D004566 2.3e-08 60.8 35 77.1
Dinv39782 Davidia involucrata HOM05D000596 ORTHO05D004566 3.1e-08 60.5 35 74.3
VMungo0251G1419 Vigna mungo HOM05D000596 ORTHO05D004566 4.0e-08 60.1 35 80.0
Dinv39779 Davidia involucrata HOM05D000596 ORTHO05D004566 6.8e-08 59.3 35 74.3
Hma1.2p1_0191F.1_g083330 Hydrangea macrophylla HOM05D000596 ORTHO05D004566 8.9e-08 58.9 35 71.4
Oeu053958.1 Olea europaea HOM05D000596 ORTHO05D004566 1.5e-07 58.2 35 74.3
Atru.chr10.1962 Acer truncatum HOM05D000596 ORTHO05D004566 2.0e-07 57.8 35 74.3
CANSAT35G1074 Cannabis sativa HOM05D000596 ORTHO05D004566 2.0e-07 57.8 35 74.3
Gohir.A05G162800 Gossypium hirsutum HOM05D000596 ORTHO05D004566 2.0e-07 57.8 35 77.1
Gohir.D05G165600 Gossypium hirsutum HOM05D000596 ORTHO05D004566 2.6e-07 57.4 35 77.1
Gorai.009G170800 Gossypium raimondii HOM05D000596 ORTHO05D004566 2.6e-07 57.4 35 77.1
Oeu038237.1 Olea europaea HOM05D000596 ORTHO05D004566 3.4e-07 57.0 35 71.4
TAR626G0683 Trochodendron aralioides HOM05D000596 ORTHO05D004566 3.4e-07 57.0 35 74.3
TAR674G0001 Trochodendron aralioides HOM05D000596 ORTHO05D004566 3.4e-07 57.0 35 74.3
Haze_06529 Corylus avellana HOM05D000596 ORTHO05D004566 5.8e-07 56.2 35 71.4
CSS0042641 Camellia sinensis var. sinensis HOM05D000596 ORTHO05D004566 7.5e-07 55.8 35 74.3
Cfa000367 Carpinus fangiana HOM05D000596 ORTHO05D004566 7.5e-07 55.8 35 68.6
vmacro03833 Vaccinium macrocarpon HOM05D000596 ORTHO05D004566 7.5e-07 55.8 35 65.7
Duzib192G0725 Durio zibethinus HOM05D000596 ORTHO05D004566 9.8e-07 55.5 35 74.3
Thecc.06G193700 Theobroma cacao HOM05D000596 ORTHO05D004566 9.8e-07 55.5 35 74.3
Oeu038238.1 Olea europaea HOM05D000596 ORTHO05D004566 1.3e-06 55.1 35 68.6
Dinv39775 Davidia involucrata HOM05D000596 ORTHO05D004566 1.7e-06 54.7 32 75.0
Lj2A284G20 Lonicera japonica HOM05D000596 ORTHO05D004566 1.7e-06 54.7 35 71.4
Lj2C284T5 Lonicera japonica HOM05D000596 ORTHO05D004566 1.7e-06 54.7 35 71.4
TAR627G0681 Trochodendron aralioides HOM05D000596 ORTHO05D004566 1.7e-06 54.7 35 68.6
CiPaw.09G053900 Carya illinoinensis HOM05D000596 ORTHO05D004566 2.2e-06 54.3 35 65.7
Ciclev10014262m.g Citrus clementina HOM05D000596 ORTHO05D004566 3.7e-06 53.5 35 65.7
Rhsim13G0176400 Rhododendron simsii HOM05D000596 ORTHO05D004566 3.7e-06 53.5 35 68.6
RhsimUnG0042800 Rhododendron simsii HOM05D000596 ORTHO05D004566 3.7e-06 53.5 35 68.6
Thecc.06G193600 Theobroma cacao HOM05D000596 ORTHO05D004566 3.7e-06 53.5 34 73.5
Peaxi162Scf01455g00005 Petunia axillaris HOM05D000596 ORTHO05D004566 4.9e-06 53.1 35 65.7
TAR627G0135 Trochodendron aralioides HOM05D000596 ORTHO05D004566 6.4e-06 52.8 35 65.7
CANSAT35G2062 Cannabis sativa HOM05D000596 ORTHO05D004566 8.3e-06 52.4 35 60.0
Gorai.009G170900 Gossypium raimondii HOM05D000596 ORTHO05D004566 8.3e-06 52.4 35 68.6
MBI18_g23704_MAGBIO Magnolia biondii HOM05D000596 ORTHO05D004566 8.3e-06 52.4 35 62.9


User provided reference genes

Program Settings