Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 4.4e-76 287.7 132 100.0
Cpa.g.sc59.83 Carica papaya HOM05D031968 ORTHO05D010556 7.6e-52 207.2 121 76.9
Cpa.g.sc59.82 Carica papaya HOM05D031968 ORTHO05D010556 3.0e-40 168.7 96 81.2
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 7.7e-12 74.3 126 34.1
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 6.5e-11 71.2 104 32.7
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 4.2e-10 68.6 122 32.8
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 7.2e-10 67.8 124 28.2
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 1.2e-09 67.0 98 31.6
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 1.2e-09 67.0 98 32.7
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 1.2e-09 67.0 99 31.3
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.1e-09 66.2 120 33.3
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.7e-09 65.1 98 36.7
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 8.0e-09 64.3 101 31.7
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 8.0e-09 64.3 126 31.0
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 8.0e-09 64.3 71 40.8
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 1.4e-08 63.5 102 33.3
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 1.4e-08 63.5 120 29.2
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 1.8e-08 63.2 41 53.7
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 1.8e-08 63.2 122 29.5
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 5.2e-08 61.6 121 29.8
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 8.8e-08 60.8 87 34.5
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 8.8e-08 60.8 96 29.2
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 8.8e-08 60.8 106 29.2
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.2e-07 60.5 126 29.4
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 1.5e-07 60.1 56 42.9
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 1.5e-07 60.1 109 28.4
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.5e-07 60.1 111 27.9
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 2.6e-07 59.3 122 27.0
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 5.7e-07 58.2 95 31.6
Phvul.006G164600 Phaseolus vulgaris HOM05D014907 ORTHO05D010556 9.7e-07 57.4 94 31.9
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 9.7e-07 57.4 100 29.0
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 1.7e-06 56.6 123 26.8
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 4.8e-06 55.1 115 26.1


User provided reference genes

Program Settings