Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 8.4e-146 520.4 273 100.0
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 4.4e-110 401.7 268 75.7
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.2e-109 399.4 269 75.5
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 6.3e-109 397.9 271 75.3
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.8e-108 396.4 272 73.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.3e-106 390.2 267 75.3
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.3e-106 390.2 266 74.4
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.7e-106 389.8 268 73.1
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.9e-106 389.0 266 75.6
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 5.0e-106 388.3 266 75.6
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.1e-105 387.1 266 73.7
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.5e-105 386.0 268 72.4
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 2.5e-105 386.0 266 74.4
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 7.2e-105 384.4 268 72.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-104 383.6 268 70.9
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.6e-104 383.3 272 71.7
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.1e-104 382.9 270 74.1
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.7e-104 382.5 272 71.7
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.7e-104 382.5 272 71.3
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 8.0e-104 380.9 272 72.1
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 8.0e-104 380.9 268 72.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 8.0e-104 380.9 265 73.2
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.0e-103 380.6 266 75.2
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.0e-103 380.6 270 71.9
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 3.0e-103 379.0 265 73.2
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.0e-103 379.0 270 73.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 5.2e-103 378.3 268 72.0
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 6.7e-103 377.9 272 73.2
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.5e-102 376.7 272 70.6
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 3.3e-102 375.6 272 71.3
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 3.3e-102 375.6 270 71.5
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 4.4e-102 375.2 272 70.6
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 5.7e-102 374.8 274 70.4
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 5.7e-102 374.8 268 68.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 9.7e-102 374.0 268 71.6
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 9.7e-102 374.0 272 70.2
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.7e-101 373.2 268 71.3
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.8e-101 372.5 272 70.2
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 6.3e-101 371.3 272 70.2
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.4e-100 370.2 268 70.1
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.4e-100 369.4 270 71.5
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 9.1e-100 367.5 274 70.8
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.6e-99 366.7 270 69.3
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.6e-99 366.7 270 70.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.5e-99 365.2 270 68.9
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 4.5e-99 365.2 272 68.4
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 7.7e-99 364.4 272 69.9
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.7e-98 363.2 270 68.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.9e-98 362.5 274 69.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 3.8e-98 362.1 270 67.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.8e-98 362.1 273 67.4
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 3.8e-98 362.1 270 68.9
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.0e-98 361.7 270 68.1
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 6.5e-98 361.3 274 68.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 6.5e-98 361.3 269 66.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 8.5e-98 360.9 273 66.7
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 8.5e-98 360.9 328 59.1
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.9e-97 359.8 272 67.6
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 2.5e-97 359.4 273 68.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 3.2e-97 359.0 274 68.6
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 3.2e-97 359.0 274 68.6
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.6e-96 355.5 272 66.9
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 6.1e-96 354.8 273 70.7
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 6.1e-96 354.8 271 70.1
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 8.0e-96 354.4 269 68.8
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.0e-95 354.0 268 67.9
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.3e-95 352.8 277 67.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 4.0e-95 352.1 277 67.1
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.2e-95 351.7 272 66.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 5.2e-95 351.7 280 66.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 5.2e-95 351.7 268 67.9
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 5.7e-94 348.2 265 68.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 7.5e-94 347.8 243 74.1
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 9.7e-94 347.4 270 66.3
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.2e-93 346.3 267 67.8
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 8.3e-93 344.4 263 67.3
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.4e-92 343.6 257 68.9
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.8e-92 343.2 271 66.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 2.4e-92 342.8 270 67.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 7.0e-92 341.3 266 66.9
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 9.1e-92 340.9 271 66.4
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 4.2e-89 332.0 241 71.8
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.7e-88 329.3 265 64.2
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.6e-88 328.9 260 65.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.6e-86 322.8 266 63.2
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.4e-86 322.0 291 59.8
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.8e-85 319.3 234 68.8
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.8e-85 318.5 266 62.4
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 5.9e-83 311.6 266 60.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 7.7e-83 311.2 267 60.7
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.9e-82 309.3 225 72.4
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.0e-82 308.5 240 66.7
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 9.5e-81 304.3 266 59.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 2.3e-79 299.7 257 59.5
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 2.3e-79 299.7 266 57.9
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.0e-79 299.3 224 67.0
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 9.8e-78 294.3 240 64.6
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 4.9e-77 292.0 390 44.9
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.2e-75 287.3 233 63.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.5e-75 285.4 268 55.6
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 9.5e-73 277.7 266 57.1
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.2e-63 245.4 273 50.9
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.4e-62 242.7 228 57.5
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 7.1e-60 235.0 267 49.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.3e-57 224.9 149 77.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.3e-53 214.2 184 64.7
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 9.2e-52 208.0 220 55.0
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.6e-50 201.4 137 69.3
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.7e-45 187.2 215 51.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 4.2e-44 182.6 183 57.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 4.6e-43 179.1 167 54.5
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 8.1e-40 168.3 138 67.4
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 1.2e-38 164.5 132 56.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.4e-38 162.9 121 72.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.1e-31 141.4 132 59.1
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.1e-27 127.1 211 42.2
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 5.1e-26 122.5 116 58.6
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.1e-25 121.3 133 56.4
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.8e-22 109.0 80 68.8
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.5e-20 103.6 245 31.8
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.1e-19 100.5 80 66.2
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 6.7e-18 95.5 108 53.7
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 2.5e-09 67.0 48 64.6


User provided reference genes

Program Settings