Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.8e-90 335.9 164 100.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.9e-16 88.6 113 46.9
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 4.9e-16 88.6 97 54.6
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.9e-15 86.7 96 53.1
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 9.2e-15 84.3 55 76.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.1e-14 83.2 58 69.0
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 3.5e-14 82.4 62 71.0
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.6e-14 82.0 55 72.7
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-13 80.9 78 56.4
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 1.3e-13 80.5 54 70.4
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.7e-13 80.1 87 54.0
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 1.7e-13 80.1 52 76.9
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 3.0e-13 79.3 62 64.5
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.0e-13 79.3 62 64.5
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 5.1e-13 78.6 81 53.1
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 6.6e-13 78.2 55 69.1
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.1e-12 77.4 52 71.2
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.1e-12 77.4 60 70.0
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 1.1e-12 77.4 53 71.7
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 3.3e-12 75.9 63 63.5
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 7.3e-12 74.7 68 57.4
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 7.3e-12 74.7 56 62.5
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 9.6e-12 74.3 81 48.1
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.6e-11 73.6 84 50.0
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.1e-11 73.2 90 48.9
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.1e-11 73.2 47 72.3
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.8e-11 72.8 52 73.1
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.6e-11 72.4 60 61.7
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 6.2e-11 71.6 48 70.8
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 8.1e-11 71.2 47 70.2
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.1e-10 70.9 120 38.3
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.4e-10 70.5 53 67.9
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-10 70.1 63 54.0
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.1e-10 69.3 72 52.8
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.1e-10 69.3 106 42.5
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 3.1e-10 69.3 49 67.3
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 4.0e-10 68.9 54 63.0
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 5.2e-10 68.6 53 64.2
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 6.9e-10 68.2 49 67.3
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.6e-09 66.2 100 44.0
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.6e-09 66.2 61 54.1
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 3.4e-09 65.9 53 60.4
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 5.8e-09 65.1 51 52.9
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 9.9e-09 64.3 59 57.6
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.3e-08 63.9 87 46.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 2.9e-08 62.8 52 59.6
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 6.4e-08 61.6 63 50.8
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 6.4e-08 61.6 55 52.7
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 6.4e-08 61.6 106 39.6
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 8.4e-08 61.2 63 54.0
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.1e-07 60.8 140 35.7
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 9.3e-07 57.8 52 57.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.6e-06 57.0 39 74.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 2.7e-06 56.2 48 56.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 6.0e-06 55.1 47 57.4


User provided reference genes

Program Settings