Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.8e-131 472.6 248 100.0
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 3.0e-57 226.1 246 54.9
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 5.1e-57 225.3 249 56.2
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.6e-55 220.3 241 53.9
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 4.4e-53 212.2 234 56.4
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 9.9e-53 211.1 204 61.3
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 2.2e-52 209.9 204 60.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 2.9e-52 209.5 234 56.4
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 6.4e-52 208.4 214 59.3
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 1.1e-51 207.6 242 56.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 1.1e-51 207.6 233 55.4
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.4e-51 207.2 246 53.3
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.4e-51 207.2 247 53.4
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.2e-50 204.1 237 54.0
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 2.7e-50 203.0 248 52.8
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.6e-50 202.2 236 53.8
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.7e-49 200.3 236 53.8
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 5.1e-49 198.7 237 54.0
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 5.1e-49 198.7 230 55.7
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 6.6e-49 198.4 244 53.7
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 8.7e-49 198.0 204 56.9
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.1e-48 197.6 204 56.9
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.1e-48 197.6 219 56.2
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.9e-48 196.8 246 49.6
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 2.5e-48 196.4 237 53.6
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.5e-48 196.4 236 53.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 7.3e-48 194.9 224 52.2
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.6e-47 193.7 242 52.1
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.6e-47 192.6 214 55.1
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.4e-46 189.9 212 55.2
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 3.1e-46 189.5 198 54.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.1e-46 189.5 232 52.2
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 3.1e-46 189.5 212 53.3
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 1.2e-45 187.6 245 50.2
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.5e-45 187.2 198 54.0
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.3e-44 184.1 241 48.1
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.3e-44 184.1 202 52.5
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.9e-44 183.0 209 52.2
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 4.9e-44 182.2 203 51.7
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.9e-43 180.3 223 50.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 4.2e-43 179.1 216 53.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 5.4e-43 178.7 208 51.0
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 7.1e-43 178.3 210 53.3
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 9.3e-43 177.9 210 51.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 6.0e-42 175.3 233 49.4
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 6.0e-42 175.3 228 49.6
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.3e-41 174.1 209 53.1
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.8e-41 173.7 233 46.4
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.8e-41 173.7 215 49.3
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.3e-41 173.3 220 52.3
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 6.7e-41 171.8 180 55.6
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 4.3e-40 169.1 215 48.8
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 5.6e-40 168.7 230 46.1
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 9.6e-40 167.9 268 43.7
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 9.6e-40 167.9 205 51.2
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.6e-39 167.2 203 52.2
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.1e-39 166.8 203 49.3
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.8e-39 166.4 244 45.9
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.8e-39 165.6 247 44.9
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 8.1e-39 164.9 244 46.7
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.8e-38 163.7 232 44.8
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 9.0e-38 161.4 186 52.7
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 9.0e-38 161.4 207 47.8
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.0e-37 160.2 228 46.9
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 3.4e-37 159.5 212 49.5
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.5e-37 159.1 207 50.2
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.5e-37 159.1 258 43.8
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 4.5e-37 159.1 246 43.9
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 9.9e-37 157.9 217 44.7
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-36 157.5 206 49.5
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 1.7e-36 157.1 191 51.3
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.9e-36 155.6 217 43.3
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.9e-36 155.6 204 47.5
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.1e-35 154.5 241 41.5
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.5e-35 153.3 213 48.4
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 2.5e-35 153.3 232 45.7
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 3.2e-35 152.9 204 47.5
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 4.2e-35 152.5 211 47.9
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 2.7e-34 149.8 122 65.6
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 4.6e-34 149.1 210 44.3
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 7.9e-34 148.3 215 46.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.0e-33 147.9 214 46.3
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 8.7e-33 144.8 246 41.5
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.5e-32 144.1 172 48.8
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.5e-32 143.3 253 44.3
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 2.1e-31 140.2 239 43.1
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 3.7e-31 139.4 211 45.5
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.7e-31 139.4 219 43.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.0e-30 136.0 202 50.5
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 2.6e-29 133.3 235 43.8
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 5.8e-29 132.1 99 66.7
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 1.0e-28 131.3 235 44.7
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.8e-28 129.4 198 44.9
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 8.4e-28 128.3 235 43.0
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 8.4e-28 128.3 235 43.0
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 8.4e-28 128.3 235 43.0
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.4e-27 127.5 196 44.9
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.9e-27 127.1 234 42.3
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 4.2e-27 125.9 206 44.7
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.2e-26 124.4 212 41.5
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.1e-26 123.6 245 42.0
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 6.1e-26 122.1 207 43.5
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 6.1e-26 122.1 189 43.4
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.0e-25 121.3 233 39.9
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.3e-25 120.9 189 45.5
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 3.0e-25 119.8 204 44.6
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.9e-25 119.4 247 38.5
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.9e-25 119.4 247 38.5
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 2.5e-24 116.7 247 38.1
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 9.7e-24 114.8 233 41.6
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.3e-23 114.4 225 38.7
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 3.7e-23 112.8 103 58.3
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 6.3e-23 112.1 243 35.8
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.4e-22 110.9 219 38.4
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.4e-22 110.2 118 57.6
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.4e-22 110.2 244 40.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.1e-22 109.8 183 43.2
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 3.1e-22 109.8 240 38.3
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 2.6e-21 106.7 110 56.4
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 3.4e-21 106.3 216 35.6
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 4.5e-21 105.9 98 57.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 5.9e-21 105.5 117 55.6
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.9e-21 105.5 193 40.4
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.0e-20 104.8 125 52.0
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 9.4e-19 98.2 188 39.4
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.7e-18 96.7 217 33.2
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.4e-14 84.3 128 43.8
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 5.0e-12 75.9 186 35.5
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 7.2e-11 72.0 156 35.3
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 7.2e-11 72.0 153 34.6
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.3e-08 63.2 130 39.2
BcaC01g03341 Brassica carinata HOM05D005697 ORTHO05D006951 5.3e-06 55.8 224 29.5


User provided reference genes

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