Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 8.1e-151 537.0 254 100.0
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 8.2e-111 404.1 230 82.6
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 2.4e-110 402.5 233 81.1
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 3.4e-109 398.7 234 78.6
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.3e-108 396.7 230 81.7
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 1.7e-108 396.4 233 78.1
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.7e-108 396.4 233 81.1
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.0e-108 394.8 233 80.3
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 6.5e-108 394.4 234 78.2
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.1e-107 393.7 240 76.2
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 1.4e-107 393.3 236 79.2
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.4e-107 393.3 233 79.4
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 2.5e-107 392.5 240 76.2
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.5e-107 392.5 233 78.1
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.5e-107 392.5 234 76.1
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 3.2e-107 392.1 233 78.1
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 4.2e-107 391.7 232 78.9
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 7.2e-107 391.0 233 78.1
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 7.2e-107 391.0 233 80.3
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 7.2e-107 391.0 233 79.0
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.2e-106 390.2 233 79.0
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.2e-106 390.2 233 76.0
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.7e-106 389.0 234 78.6
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 2.7e-106 389.0 233 76.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 4.6e-106 388.3 233 78.1
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 4.6e-106 388.3 233 77.7
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 6.1e-106 387.9 233 76.0
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 6.1e-106 387.9 233 79.0
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.0e-105 387.1 263 71.1
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.8e-105 386.3 233 79.0
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 3.0e-105 385.6 234 76.1
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 3.0e-105 385.6 234 76.1
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 3.0e-105 385.6 234 76.1
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 3.9e-105 385.2 234 76.5
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 3.9e-105 385.2 234 76.5
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 5.1e-105 384.8 234 76.5
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 5.1e-105 384.8 233 75.5
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 6.7e-105 384.4 234 76.1
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 1.9e-104 382.9 233 75.5
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 2.5e-104 382.5 234 75.6
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 2.5e-104 382.5 234 75.6
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 3.3e-104 382.1 242 76.4
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 9.7e-104 380.6 234 76.5
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 9.7e-104 380.6 233 76.0
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.3e-103 380.2 244 73.4
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.6e-103 379.8 234 75.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.6e-103 379.8 231 78.4
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 3.1e-102 375.6 230 77.4
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 5.3e-102 374.8 234 73.9
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.0e-102 374.0 228 78.1
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 9.0e-102 374.0 234 73.9
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 9.0e-102 374.0 259 68.7
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.2e-101 373.6 233 73.4
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.5e-101 373.2 234 73.9
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.6e-101 372.5 259 71.0
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.5e-101 371.7 234 74.8
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 4.5e-101 371.7 233 74.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.9e-101 371.3 235 75.7
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 7.7e-101 370.9 234 74.8
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 7.7e-101 370.9 246 74.4
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.0e-100 370.5 234 74.8
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.9e-100 369.0 234 73.1
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 3.8e-100 368.6 238 73.1
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 3.8e-100 368.6 238 73.5
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 6.5e-100 367.9 234 74.4
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 8.5e-100 367.5 233 75.1
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.4e-99 366.7 234 72.6
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.6e-98 363.2 225 76.9
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.1e-98 362.8 234 73.9
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.2e-95 352.8 233 72.1
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 2.6e-93 345.9 236 69.5
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 5.0e-92 341.7 233 70.8
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 7.9e-90 334.3 235 67.7
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.1e-88 330.5 232 70.7
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 2.6e-88 329.3 231 66.7
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.8e-86 323.2 234 67.1
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 1.6e-85 320.1 233 68.2
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.7e-84 316.6 197 77.2
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.3e-81 306.2 230 63.9
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.4e-75 284.3 231 63.6
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 6.8e-73 278.1 194 68.6
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.5e-69 265.4 187 67.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 3.8e-68 262.3 201 64.2
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 3.2e-67 259.2 226 58.4
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.7e-60 236.9 129 86.8
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 5.0e-60 235.3 159 69.8
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 9.5e-59 231.1 145 75.2
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.0e-57 227.6 157 66.2
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 4.0e-57 225.7 235 48.5
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 2.0e-56 223.4 230 46.5
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.6e-56 223.0 173 61.8
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 3.7e-55 219.2 227 47.6
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 9.2e-54 214.5 229 47.6
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 3.3e-51 206.1 130 75.4
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 6.8e-49 198.4 223 49.3
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.1e-46 189.1 188 53.2
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 6.4e-39 165.2 88 86.4
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.4e-30 136.7 242 34.7
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 2.3e-28 130.2 245 37.1
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 8.6e-28 128.3 125 51.2
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.8e-23 112.8 83 66.3
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.1e-21 107.1 186 34.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 6.9e-17 92.0 262 30.2
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.9e-17 92.0 45 93.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.1e-14 84.7 72 52.8
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-09 66.2 220 24.5
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.2e-07 60.5 44 56.8
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 8.4e-07 58.5 37 73.0
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 8.4e-07 58.5 37 73.0
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.2e-06 56.6 35 71.4
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 5.5e-06 55.8 28 75.0


User provided reference genes

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