Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.8e-158 562.4 402 100.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.9e-90 337.0 380 60.0
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.5e-90 336.7 370 62.7
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.4e-88 330.9 366 60.1
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.4e-88 330.1 388 56.4
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.4e-88 330.1 368 64.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.8e-86 322.8 362 60.8
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 7.1e-85 318.5 295 60.0
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 9.3e-85 318.2 346 63.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.7e-84 316.6 376 54.5
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 3.5e-84 316.2 396 54.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 7.9e-84 315.1 374 59.1
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 5.1e-83 312.4 377 62.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.3e-82 309.3 369 58.0
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 9.6e-82 308.1 377 57.0
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.8e-81 306.6 344 58.7
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 8.2e-81 305.1 371 55.5
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 8.2e-81 305.1 360 55.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.0e-79 300.4 344 58.1
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 3.4e-79 299.7 371 59.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 4.5e-79 299.3 347 59.9
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.0e-78 298.1 383 54.3
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.2e-78 297.0 364 55.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.8e-78 296.2 354 53.4
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 8.5e-78 295.0 297 55.9
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 2.5e-77 293.5 345 60.9
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 3.2e-77 293.1 352 56.2
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 4.2e-77 292.7 383 54.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.2e-76 291.2 276 59.4
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.6e-76 290.8 406 56.9
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 7.9e-76 288.5 406 56.7
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.0e-75 288.1 373 60.3
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.8e-75 287.3 417 54.0
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.9e-75 286.2 406 56.4
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.5e-74 284.3 308 53.6
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.5e-74 284.3 339 56.6
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.9e-74 283.9 369 60.2
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 5.7e-74 282.3 395 51.1
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 9.7e-74 281.6 353 58.6
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.3e-73 281.2 392 53.8
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 2.2e-73 280.4 299 55.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.2e-73 280.4 359 58.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 4.8e-73 279.3 300 55.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 4.8e-73 279.3 346 59.0
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 8.2e-73 278.5 307 57.7
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.1e-72 278.1 393 51.9
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.4e-72 277.7 271 56.8
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.8e-72 277.3 497 44.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 2.4e-72 276.9 274 58.0
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 3.1e-72 276.6 382 54.5
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 9.1e-72 275.0 371 54.7
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 2.6e-71 273.5 222 71.6
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 4.5e-71 272.7 361 55.4
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 7.7e-71 271.9 357 60.5
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.0e-70 271.6 300 53.7
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.7e-70 270.8 307 52.4
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 2.2e-70 270.4 346 52.3
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.2e-70 270.4 360 59.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.1e-69 268.1 364 53.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 5.5e-69 265.8 401 55.9
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 5.5e-69 265.8 401 55.4
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.4e-69 265.0 286 53.5
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.6e-68 263.1 286 53.1
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 3.0e-67 260.0 303 52.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 1.1e-66 258.1 303 55.1
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 3.3e-66 256.5 280 56.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.3e-65 254.6 356 52.0
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 2.8e-65 253.4 339 60.2
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.8e-64 250.8 316 51.9
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 3.1e-64 250.0 304 54.3
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 6.9e-64 248.8 290 51.0
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.5e-63 247.7 359 51.0
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 4.5e-63 246.1 310 57.1
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 5.9e-63 245.7 269 60.2
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.0e-62 245.0 298 47.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 6.5e-62 242.3 353 50.1
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.5e-61 240.4 307 51.1
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 4.2e-61 239.6 217 62.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 9.4e-61 238.4 205 66.8
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 2.7e-60 236.9 215 56.7
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.1e-60 235.7 373 49.6
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 7.9e-60 235.3 367 51.8
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.0e-59 235.0 366 49.2
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.8e-59 234.2 199 58.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 2.6e-58 230.3 348 57.5
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.3e-58 229.9 355 41.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.3e-57 228.0 316 54.4
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.4e-56 223.8 267 50.9
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 2.4e-56 223.8 295 53.2
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 7.0e-56 222.2 219 57.1
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.2e-54 217.2 204 59.8
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 8.5e-54 215.3 418 42.3
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.9e-53 214.2 189 60.8
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.2e-53 213.4 260 47.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 4.2e-53 213.0 166 66.3
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.2e-53 213.0 271 52.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.1e-52 210.7 242 53.3
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.7e-52 210.3 218 53.7
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.8e-51 207.6 221 52.0
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 4.0e-51 206.5 218 53.2
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 4.4e-50 203.0 193 52.8
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.2e-47 194.9 196 54.6
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 5.9e-47 192.6 252 46.4
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.1e-44 184.1 203 51.7
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 4.4e-42 176.4 278 52.5
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 4.1e-40 169.9 205 47.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.9e-38 163.7 195 48.7
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 8.6e-38 162.2 213 43.2
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 7.5e-34 149.1 233 39.5
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 2.4e-32 144.1 214 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 8.6e-30 135.6 194 40.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.4e-26 123.6 154 48.1
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.2e-16 90.5 160 38.8
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 4.1e-16 90.1 58 75.9
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.2e-12 78.6 56 71.4


User provided reference genes

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