Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.104 Carica papaya HOM05D009286 ORTHO05D011130 5.5e-90 334.3 177 100.0
Manes.15G051025 Manihot esculenta HOM05D009286 ORTHO05D011130 1.2e-20 104.0 156 48.1
Ciclev10006054m.g Citrus clementina HOM05D009286 ORTHO05D011130 8.7e-19 97.8 158 42.4
CiPaw.01G125200 Carya illinoinensis HOM05D009286 ORTHO05D011130 1.1e-18 97.4 164 45.7
Atru.chr4.1762 Acer truncatum HOM05D009286 ORTHO05D011130 2.5e-18 96.3 153 46.4
CiPaw.02G067700 Carya illinoinensis HOM05D009286 ORTHO05D011130 1.9e-13 80.1 77 62.3
QL06p023574 Quercus lobata HOM05D009286 ORTHO05D011130 1.2e-12 77.4 77 59.7
COL.COLO4_20307 Corchorus olitorius HOM05D009286 ORTHO05D011130 1.6e-12 77.0 79 62.0
Gohir.D02G031400 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.6e-12 77.0 92 54.3
Gorai.005G034900 Gossypium raimondii HOM05D009286 ORTHO05D011130 1.6e-12 77.0 92 54.3
Duzib151G0679 Durio zibethinus HOM05D009286 ORTHO05D011130 2.1e-12 76.6 79 60.8
Cfa014890 Carpinus fangiana HOM05D009286 ORTHO05D011130 3.5e-12 75.9 79 60.8
Actinidia39956 Actinidia chinensis HOM05D000290 ORTHO05D006586 6.1e-12 75.1 151 37.7
Thecc.04G210000 Theobroma cacao HOM05D009286 ORTHO05D011130 7.9e-12 74.7 98 55.1
Haze_11576 Corylus avellana HOM05D009286 ORTHO05D011130 1.0e-11 74.3 79 60.8
Gohir.A02G024000 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.3e-11 73.9 101 49.5
Manes.03G149800 Manihot esculenta HOM05D009286 ORTHO05D011130 3.0e-11 72.8 79 59.5
Gohir.A09G202700 Gossypium hirsutum HOM05D009286 ORTHO05D011130 3.9e-11 72.4 80 57.5
Gohir.D09G196800 Gossypium hirsutum HOM05D009286 ORTHO05D011130 3.9e-11 72.4 80 57.5
Gorai.006G220200 Gossypium raimondii HOM05D009286 ORTHO05D011130 3.9e-11 72.4 80 57.5
Duzib268G0451 Durio zibethinus HOM05D009286 ORTHO05D011130 3.3e-10 69.3 98 51.0
Duzib268G0949 Durio zibethinus HOM05D009286 ORTHO05D011130 3.3e-10 69.3 98 51.0
Sed0020601 Sechium edule HOM05D009286 ORTHO05D011130 7.4e-10 68.2 72 58.3
C05p02950 Brassica napus HOM05D008913 ORTHO05D011130 1.6e-09 67.0 131 40.5
BolC5t29076H Brassica oleracea HOM05D008913 ORTHO05D011130 1.6e-09 67.0 131 40.5
A10p03200 Brassica napus HOM05D008913 ORTHO05D011130 2.8e-09 66.2 131 40.5
CARHR004160 Cardamine hirsuta HOM05D008913 ORTHO05D011130 2.4e-08 63.2 152 37.5
Potri.001G051300 Populus trichocarpa HOM05D009286 ORTHO05D011130 2.4e-08 63.2 72 56.9
Potri.003G177200 Populus trichocarpa HOM05D009286 ORTHO05D011130 2.4e-08 63.2 79 54.4
BraA10t42594Z Brassica rapa HOM05D008913 ORTHO05D011317 6.9e-08 61.6 132 40.2
Sp1g03610 Schrenkiella parvula HOM05D008913 ORTHO05D011130 6.9e-08 61.6 78 51.3
ATR0787G204 Amborella trichopoda HOM05D009286 ORTHO05D011130 1.2e-07 60.8 74 52.7
Sabra03G0129800 Salix brachista HOM05D009286 ORTHO05D011130 1.2e-07 60.8 86 50.0
MBI07_g22395_MAGBIO Magnolia biondii HOM05D009286 ORTHO05D011130 3.4e-07 59.3 141 39.0
TAR633G2369 Trochodendron aralioides HOM05D009286 ORTHO05D011130 3.4e-07 59.3 58 58.6
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 4.5e-07 58.9 133 39.8
Migut.G00633 Erythranthe guttata HOM05D009286 ORTHO05D011130 7.7e-07 58.2 84 51.2
Oeu063490.1 Olea europaea HOM05D009286 ORTHO05D011130 2.2e-06 56.6 85 51.8
Rhsim02G0053900 Rhododendron simsii HOM05D009286 ORTHO05D011130 2.9e-06 56.2 138 34.1


User provided reference genes

Program Settings