Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc587.2 Carica papaya HOM05D000002 ORTHO05D001134 2.1e-42 175.3 87 100.0
Cpa.g.sc100.30 Carica papaya HOM05D000002 ORTHO05D001134 1.8e-25 119.0 83 71.1
Cpa.g.sc33.42 Carica papaya HOM05D000002 ORTHO05D001134 1.2e-16 89.7 60 73.3
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 1.5e-16 89.4 66 69.7
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 2.4e-14 82.0 66 60.6
Cpa.g.sc2644.1 Carica papaya HOM05D000002 ORTHO05D001134 7.1e-14 80.5 64 60.9
Cpa.g.sc11.83 Carica papaya HOM05D000002 ORTHO05D001134 7.8e-13 77.0 60 60.0
Cpa.g.sc28.66 Carica papaya HOM05D000002 ORTHO05D001134 1.0e-12 76.6 60 63.3
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 2.5e-11 72.0 69 49.3
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 4.3e-11 71.2 67 49.3
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 1.6e-10 69.3 67 49.3
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 2.1e-10 68.9 67 47.8
CANSAT35G0681 Cannabis sativa HOM05D000002 ORTHO05D001134 2.8e-10 68.6 67 49.3
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 2.8e-10 68.6 64 50.0
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 3.6e-10 68.2 66 51.5
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 4.8e-10 67.8 69 47.8
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 1.1e-09 66.6 67 47.8
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 1.4e-09 66.2 67 49.3
Sabra04G0092600 Salix brachista HOM05D000002 ORTHO05D001134 1.4e-09 66.2 67 46.3
TPR.G29589 Trifolium pratense HOM05D000002 ORTHO05D001134 1.4e-09 66.2 67 49.3
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 2.4e-09 65.5 67 47.8
Cpa.g.sc274.2 Carica papaya HOM05D000002 ORTHO05D001134 2.4e-09 65.5 44 72.7
Sabra16G0095800 Salix brachista HOM05D000002 ORTHO05D001134 2.4e-09 65.5 64 46.9
Atru.chr8.1423 Acer truncatum HOM05D000002 ORTHO05D001134 3.1e-09 65.1 67 44.8
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 3.1e-09 65.1 67 46.3
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 4.0e-09 64.7 68 45.6
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 4.0e-09 64.7 67 47.8
Atru.chr1.3241 Acer truncatum HOM05D000002 ORTHO05D001134 5.3e-09 64.3 66 47.0
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.3e-09 64.3 67 43.3
CANSAT01G1051 Cannabis sativa HOM05D000002 ORTHO05D001134 5.3e-09 64.3 67 47.8
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.9 67 43.3
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.0e-09 63.5 67 43.3
CANSAT01G0351 Cannabis sativa HOM05D000002 ORTHO05D001134 9.0e-09 63.5 67 46.3
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.2 67 43.3
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.2 67 43.3
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.2 67 43.3
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.2 67 43.3
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.2e-08 63.2 67 43.3
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.5e-08 62.8 67 43.3
CANSAT25G1544 Cannabis sativa HOM05D000002 ORTHO05D001134 2.0e-08 62.4 84 41.7
AUR62019719 Chenopodium quinoa HOM05D000002 ORTHO05D001134 4.4e-08 61.2 67 43.3
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.8e-08 60.8 67 44.8
Rhsim01G0098800 Rhododendron simsii HOM05D000002 ORTHO05D001134 5.8e-08 60.8 60 51.7
Rhsim09G0102700 Rhododendron simsii HOM05D001650 ORTHO05D001592 5.8e-08 60.8 60 51.7
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 1.7e-07 59.3 67 46.3
AUR62029287 Chenopodium quinoa HOM05D000893 ORTHO05D001134 2.9e-07 58.5 67 47.8
CANSAT11G0903 Cannabis sativa HOM05D000002 ORTHO05D001134 6.4e-07 57.4 55 45.5
CANSAT01G2951 Cannabis sativa HOM05D000002 ORTHO05D001134 8.4e-07 57.0 78 39.7
BcaB05g23570 Brassica carinata HOM05D000002 ORTHO05D001134 1.9e-06 55.8 64 39.1
AT5G53670 Arabidopsis thaliana HOM05D000002 ORTHO05D001134 4.2e-06 54.7 68 39.7
PSO339G4992 Papaver somniferum HOM05D000002 ORTHO05D001134 4.2e-06 54.7 72 43.1
TWI79G0579 Tripterygium wilfordii HOM05D000002 ORTHO05D001134 5.4e-06 54.3 59 42.4
EL10Ac1g01667 Beta vulgaris HOM05D000002 ORTHO05D000001 9.3e-06 53.5 64 39.1
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 9.3e-06 53.5 66 43.9


User provided reference genes

Program Settings