Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 1.7e-76 289.3 143 100.0
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 4.7e-47 191.4 130 68.5
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 1.7e-44 183.0 130 63.1
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 8.3e-44 180.6 130 66.2
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 1.8e-43 179.5 128 66.4
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 4.1e-43 178.3 130 61.5
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 3.8e-41 171.8 131 60.3
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 5.0e-41 171.4 131 61.1
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 5.0e-41 171.4 130 63.1
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.1e-40 170.2 131 58.8
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 1.5e-40 169.9 131 61.8
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-40 169.9 131 60.3
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-40 169.9 131 60.3
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-40 169.9 131 60.3
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.5e-40 169.9 131 60.3
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.5e-40 169.9 132 61.4
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 4.2e-40 168.3 130 57.7
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 5.5e-40 167.9 131 60.3
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 9.5e-40 167.2 130 60.8
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 9.5e-40 167.2 132 59.8
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.6e-39 166.4 130 56.9
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.6e-39 166.4 130 60.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 2.1e-39 166.0 130 61.5
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.1e-39 166.0 131 58.8
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 4.7e-39 164.9 131 59.5
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 8.0e-39 164.1 132 56.8
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 1.0e-38 163.7 130 56.2
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.0e-38 163.7 130 61.5
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.4e-38 163.3 131 58.8
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.8e-38 162.9 132 56.8
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 1.8e-38 162.9 131 58.8
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 3.0e-38 162.2 132 58.3
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 1.2e-37 160.2 130 55.4
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 1.2e-37 160.2 130 58.5
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.2e-37 160.2 132 56.1
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 1.5e-37 159.8 132 56.1
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 2.6e-37 159.1 131 55.7
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 2.6e-37 159.1 132 56.1
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 2.6e-37 159.1 130 53.8
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 4.4e-37 158.3 130 57.7
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 4.4e-37 158.3 130 53.8
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 7.5e-37 157.5 130 56.2
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 7.5e-37 157.5 130 58.5
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 1.7e-36 156.4 133 54.9
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 8.3e-36 154.1 131 54.2
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 1.4e-35 153.3 130 55.4
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 2.4e-35 152.5 130 57.7
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 3.1e-35 152.1 132 54.5
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 5.4e-35 151.4 133 57.9
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 5.4e-35 151.4 118 60.2
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.6e-34 149.8 132 53.0
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 1.6e-34 149.8 109 64.2
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 2.7e-34 149.1 112 63.4
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 4.5e-34 148.3 133 57.1
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 4.5e-34 148.3 132 52.3
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 4.5e-34 148.3 107 58.9
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 7.8e-34 147.5 131 51.9
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.0e-33 147.1 133 56.4
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 1.3e-33 146.7 117 56.4
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 1.7e-33 146.4 114 55.3
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 5.0e-33 144.8 123 55.3
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 5.0e-33 144.8 123 55.3
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 5.0e-33 144.8 112 61.6
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.5e-32 143.3 130 50.8
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 2.5e-32 142.5 110 56.4
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 5.6e-32 141.4 103 61.2
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 7.3e-32 141.0 118 53.4
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 9.5e-32 140.6 132 50.0
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 9.5e-32 140.6 131 51.9
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 9.5e-32 140.6 131 50.4
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 1.6e-31 139.8 131 49.6
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 2.8e-31 139.0 132 51.5
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 2.8e-31 139.0 131 51.9
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 2.8e-31 139.0 112 55.4
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 3.6e-31 138.7 133 50.4
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 6.1e-31 137.9 132 50.0
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 1.0e-30 137.1 131 50.4
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-30 136.7 111 57.7
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-30 136.7 132 52.3
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 1.4e-30 136.7 132 52.3
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 1.4e-30 136.7 132 52.3
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 1.4e-30 136.7 132 53.0
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 1.8e-30 136.3 118 52.5
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 3.0e-30 135.6 131 48.9
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 8.9e-30 134.0 130 46.2
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.2e-29 133.7 131 47.3
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.5e-29 133.3 130 48.5
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.6e-29 132.5 131 46.6
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 4.4e-29 131.7 103 58.3
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 5.8e-29 131.3 134 48.5
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 6.4e-28 127.9 104 57.7
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 5.4e-27 124.8 116 52.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 3.5e-26 122.1 131 46.6
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 4.6e-26 121.7 111 50.5
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.3e-25 120.2 123 45.5
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.3e-25 120.2 111 51.4
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 5.0e-25 118.2 95 54.7
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.5e-24 116.7 122 49.2
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 7.3e-24 114.4 107 47.7
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 3.6e-23 112.1 69 66.7
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.0e-21 106.3 115 45.2
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 3.4e-21 105.5 81 59.3
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 3.4e-21 105.5 81 59.3
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 3.4e-21 105.5 81 59.3
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 3.4e-21 105.5 77 57.1
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 5.8e-21 104.8 72 65.3
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 1.7e-20 103.2 81 58.0
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 4.9e-20 101.7 92 52.2
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 6.4e-20 101.3 105 45.7
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 6.4e-20 101.3 105 45.7
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 9.2e-19 97.4 106 42.5
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 1.0e-17 94.0 115 41.7
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 1.5e-16 90.1 102 38.2
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 4.3e-16 88.6 115 38.3
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 3.1e-14 82.4 128 32.0
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 6.8e-14 81.3 131 37.4
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 4.9e-12 75.1 81 42.0
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 4.1e-11 72.0 66 51.5
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 2.7e-10 69.3 72 38.9
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 8.6e-09 64.3 60 50.0
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.5e-08 62.8 34 85.3
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 7.3e-08 61.2 33 81.8
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 7.3e-08 61.2 33 81.8
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.2e-07 60.5 49 61.2
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.8e-07 59.3 33 78.8
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 2.8e-07 59.3 33 81.8
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.8e-07 59.3 33 78.8
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 8.1e-07 57.8 105 34.3
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 8.1e-07 57.8 31 80.6
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 1.4e-06 57.0 33 78.8
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 1.4e-06 57.0 33 78.8
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.4e-06 57.0 36 72.2
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 5.2e-06 55.1 63 41.3


User provided reference genes

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