Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.7e-67 257.3 137 100.0
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.7e-38 162.9 135 68.1
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-37 159.8 135 68.9
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 7.2e-37 157.5 135 64.4
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.6e-36 156.4 135 64.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.8e-35 152.9 129 65.9
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 5.1e-35 151.4 135 64.4
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 6.7e-35 151.0 135 63.0
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.3e-34 148.7 131 63.4
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.4e-34 148.3 123 66.7
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 4.4e-34 148.3 135 63.0
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.3e-33 146.7 134 62.7
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-33 146.7 126 64.3
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.3e-33 146.7 135 64.4
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-33 146.7 122 66.4
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 2.2e-33 146.0 125 64.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.8e-33 145.6 123 65.0
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-33 145.2 126 62.7
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.7e-33 145.2 126 62.7
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.7e-33 145.2 134 61.2
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 3.7e-33 145.2 136 63.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 4.8e-33 144.8 135 60.7
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.8e-33 144.8 126 66.7
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 8.2e-33 144.1 135 59.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.4e-32 143.3 135 61.5
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.4e-32 143.3 135 60.7
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.8e-32 142.9 131 64.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 3.1e-32 142.1 130 62.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.1e-32 142.1 135 61.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 9.1e-32 140.6 135 63.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.2e-31 140.2 135 62.2
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.5e-31 139.8 137 59.9
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.5e-31 139.8 130 63.1
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.5e-31 139.8 135 57.8
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.0e-31 139.4 130 61.5
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.0e-31 139.4 119 64.7
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.6e-31 139.0 132 62.9
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 3.5e-31 138.7 129 58.9
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 3.5e-31 138.7 131 62.6
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.5e-31 138.7 129 58.9
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 4.5e-31 138.3 127 63.8
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 4.5e-31 138.3 127 63.8
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 4.5e-31 138.3 127 63.8
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 4.5e-31 138.3 117 65.0
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 5.9e-31 137.9 126 61.9
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 5.9e-31 137.9 126 61.9
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.9e-31 137.9 122 63.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 7.7e-31 137.5 135 58.5
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.0e-30 137.1 119 64.7
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.0e-30 137.1 131 61.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.3e-30 136.7 127 63.8
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.3e-30 136.7 127 63.8
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.3e-30 136.7 131 60.3
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.7e-30 136.3 131 59.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 2.2e-30 136.0 136 57.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.9e-30 135.6 116 67.2
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.9e-30 135.6 131 58.8
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 8.5e-30 134.0 135 54.8
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.4e-29 133.3 131 58.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.4e-29 133.3 126 62.7
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.9e-29 132.9 137 57.7
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.5e-29 132.5 132 56.1
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 7.2e-29 131.0 131 59.5
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 7.2e-29 131.0 137 56.9
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.2e-29 131.0 131 58.0
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 9.4e-29 130.6 127 58.3
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.2e-28 130.2 122 63.9
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.2e-28 130.2 113 64.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.6e-28 129.8 131 58.8
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.1e-28 129.4 137 56.9
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.1e-28 129.4 121 62.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 2.7e-28 129.0 121 61.2
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 6.1e-28 127.9 135 56.3
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 6.1e-28 127.9 126 63.5
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 6.1e-28 127.9 125 57.6
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 6.1e-28 127.9 121 60.3
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.0e-27 127.1 141 55.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 1.0e-27 127.1 139 56.8
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-27 126.7 137 57.7
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.8e-27 126.3 126 62.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.8e-27 126.3 114 61.4
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.3e-27 125.9 100 67.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 2.3e-27 125.9 133 54.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.0e-27 125.6 134 55.2
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.1e-26 123.6 136 53.7
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.5e-26 123.2 138 51.4
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.0e-26 122.9 136 53.7
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.0e-26 122.9 108 61.1
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 4.4e-26 121.7 135 54.1
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 9.7e-26 120.6 110 59.1
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.2e-25 119.4 137 54.7
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.3e-25 117.9 138 53.6
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 6.3e-25 117.9 134 50.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 8.2e-25 117.5 135 50.4
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 8.2e-25 117.5 131 56.5
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 2.4e-24 115.9 124 56.5
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.4e-24 115.9 133 51.9
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 9.1e-24 114.0 107 59.8
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.6e-23 112.5 107 61.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 4.5e-23 111.7 126 52.4
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 4.5e-23 111.7 131 49.6
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-22 109.4 122 55.7
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.5e-22 107.8 124 50.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.5e-21 106.7 131 48.1
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.9e-21 106.3 134 47.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.5e-21 105.9 126 50.8
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.2e-21 105.1 101 54.5
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.1e-20 102.8 130 46.9
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 8.0e-20 100.9 71 70.4
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 6.8e-19 97.8 120 50.8
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 2.0e-18 96.3 109 54.1
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.6e-18 95.9 97 55.7
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 4.4e-18 95.1 113 51.3
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.3e-17 93.6 127 41.7
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.8e-17 91.7 68 70.6
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.3e-16 88.2 68 72.1
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 5.3e-16 88.2 119 44.5
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.7e-14 83.2 83 55.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.8e-14 82.0 86 59.3
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.8e-14 82.0 91 49.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.5e-13 80.1 91 54.9
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 7.2e-13 77.8 78 50.0
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 9.1e-08 60.8 105 37.1
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.6e-07 60.1 124 34.7
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 4.5e-07 58.5 99 37.4


User provided reference genes

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