Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 9.8e-136 486.9 260 100.0
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 6.6e-108 394.4 271 81.5
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.1e-106 389.4 269 80.7
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 4.7e-106 388.3 271 80.4
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 8.1e-106 387.5 269 80.3
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.6e-104 382.5 273 77.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.4e-104 382.1 269 79.9
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.6e-101 371.7 271 77.9
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 2.5e-99 365.9 274 78.8
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.8e-98 361.7 271 72.7
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.5e-96 356.7 280 72.9
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 3.4e-96 355.5 272 73.9
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 9.9e-96 354.0 247 79.8
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 9.9e-96 354.0 271 74.2
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.4e-94 350.1 275 72.7
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.4e-94 350.1 273 73.6
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.7e-93 345.9 268 72.0
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.6e-93 345.1 282 71.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 4.6e-93 345.1 271 72.7
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 6.0e-93 344.7 275 70.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.3e-92 343.6 275 73.1
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.3e-92 342.8 280 69.3
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 6.7e-92 341.3 305 69.2
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.5e-91 339.3 290 68.3
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.3e-91 339.0 290 68.3
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.3e-90 337.0 250 74.8
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.6e-90 336.7 249 75.5
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.6e-90 336.7 281 69.4
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.8e-90 335.9 282 66.3
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 3.7e-90 335.5 274 70.1
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 8.1e-90 334.3 273 71.4
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.4e-89 333.6 249 74.7
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.8e-89 333.2 270 69.6
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.8e-89 333.2 269 70.6
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.4e-89 332.8 275 69.8
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 5.3e-89 331.6 246 74.4
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 5.3e-89 331.6 295 66.1
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 6.9e-89 331.3 280 69.3
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 6.9e-89 331.3 282 68.1
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 3.4e-88 328.9 243 73.3
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.3e-87 327.0 286 66.4
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.7e-87 326.6 282 66.3
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.7e-87 326.6 272 68.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.2e-87 326.2 242 72.3
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.9e-87 325.9 283 68.2
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 3.8e-87 325.5 273 67.8
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.9e-87 325.1 273 67.8
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.9e-87 325.1 273 67.8
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.4e-86 323.6 277 69.0
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.9e-86 323.2 273 67.4
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.6e-85 320.1 301 61.5
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.5e-85 318.9 281 66.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 7.9e-85 317.8 300 62.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.3e-84 316.2 294 63.9
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 3.0e-84 315.8 268 67.2
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 8.7e-84 314.3 307 61.9
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.5e-83 313.5 284 65.5
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.9e-83 313.2 286 64.3
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.9e-83 313.2 280 66.1
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 4.3e-83 312.0 269 67.3
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 5.6e-83 311.6 273 67.0
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 7.4e-83 311.2 277 66.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 7.4e-83 311.2 288 64.6
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.3e-82 310.5 302 60.3
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.3e-82 310.5 289 63.0
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.6e-82 310.1 289 63.0
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 6.2e-82 308.1 282 65.2
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.1e-81 307.4 280 63.6
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.8e-81 306.6 273 65.2
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.8e-81 306.6 273 65.2
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 6.9e-81 304.7 302 59.9
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 9.0e-81 304.3 268 64.2
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.5e-80 302.0 303 62.0
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 5.8e-80 301.6 268 64.9
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 7.6e-80 301.2 288 62.2
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.2e-79 299.7 273 65.6
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 3.8e-79 298.9 290 60.7
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.9e-79 298.5 277 64.6
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.9e-79 298.5 277 64.6
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 4.9e-79 298.5 299 60.2
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 6.5e-79 298.1 294 61.9
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 7.1e-78 294.7 325 55.4
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.3e-76 289.7 211 75.4
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.7e-75 285.0 302 59.3
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 4.8e-74 282.0 275 60.4
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.8e-73 280.0 213 72.3
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.5e-72 275.4 271 60.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 2.9e-71 272.7 287 57.1
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 7.2e-70 268.1 279 60.9
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.2e-69 267.3 267 61.4
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.1e-69 265.0 272 59.2
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.8e-68 263.5 257 61.5
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 5.1e-68 261.9 311 54.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.2e-66 256.5 285 55.1
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.4e-65 253.1 277 58.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.2e-64 250.8 274 58.0
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 4.5e-64 248.8 276 57.2
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.0e-63 247.7 393 44.5
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.7e-63 246.9 181 75.1
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.1e-61 240.0 273 57.1
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.8e-58 229.6 174 73.6
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 9.1e-57 224.6 174 72.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 2.6e-48 196.4 204 59.3
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.5e-48 196.1 165 69.1
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.2e-42 174.9 134 73.1
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.1e-37 160.2 135 63.7
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 3.6e-37 159.5 158 60.1
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 6.1e-37 158.7 134 68.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 6.8e-36 155.2 163 58.3
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.4e-33 146.7 181 51.4
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 8.6e-31 138.3 134 63.4
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.5e-30 136.7 98 77.6
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.0e-24 117.1 108 65.7
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.5e-24 116.3 145 52.4
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.5e-24 115.9 113 61.9
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 2.9e-23 113.2 67 85.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 3.3e-14 83.2 246 31.3
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.5e-11 74.3 59 66.1
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.3e-10 71.2 98 51.0
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.7e-07 60.8 42 69.0
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 6.6e-07 58.9 195 31.3
MBI19_g32902_MAGBIO Magnolia biondii HOM05D000487 ORTHO05D011599 4.3e-06 56.2 45 68.9


User provided reference genes

Program Settings