Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 7.2e-245 850.1 422 100.0
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 9.8e-202 706.8 425 81.2
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 9.8e-202 706.8 423 80.1
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 3.1e-200 701.8 429 80.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 5.9e-199 697.6 425 80.5
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.3e-197 691.4 423 80.6
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 5.6e-197 691.0 424 78.1
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.2e-194 683.3 426 78.9
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.5e-194 682.9 423 79.2
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.4e-194 681.8 423 79.2
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.7e-193 679.5 423 78.0
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 2.9e-193 678.7 421 76.0
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 3.2e-192 675.2 424 78.8
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 4.1e-192 674.9 422 79.9
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 2.7e-191 672.2 419 78.8
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 3.5e-191 671.8 423 77.3
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 7.8e-191 670.6 426 75.8
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.0e-190 670.2 423 78.3
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.0e-190 670.2 424 78.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.3e-190 669.8 423 78.0
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.0e-190 668.7 423 78.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 8.6e-190 667.2 423 77.3
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.1e-189 666.8 425 78.4
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.5e-189 666.4 423 78.0
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-189 666.0 423 76.4
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.3e-189 665.2 423 77.8
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.3e-189 664.1 421 76.2
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 4.7e-188 661.4 420 78.3
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 1.1e-187 660.2 419 75.9
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 4.0e-187 658.3 426 77.2
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.2e-186 656.8 421 77.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 4.4e-186 654.8 423 76.4
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 1.3e-185 653.3 424 75.7
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 8.3e-185 650.6 424 75.9
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 5.4e-184 647.9 424 74.5
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.2e-183 646.7 425 75.3
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.6e-183 646.4 419 76.4
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.8e-183 644.0 421 74.6
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 7.8e-183 644.0 412 74.3
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 2.5e-181 639.0 425 73.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.1e-179 633.6 423 75.2
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.4e-179 633.3 413 76.8
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.4e-179 633.3 423 74.9
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 5.2e-179 631.3 427 73.8
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 6.8e-179 630.9 436 71.8
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 8.9e-179 630.6 427 73.5
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 9.9e-178 627.1 429 73.0
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 8.3e-177 624.0 423 73.0
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.1e-176 623.6 423 73.3
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.4e-176 622.5 405 78.5
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 5.4e-176 621.3 421 73.2
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.2e-175 620.2 422 73.7
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.0e-174 617.1 421 73.2
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 8.6e-174 614.0 437 71.4
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.5e-173 613.2 404 74.3
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 2.8e-172 609.0 413 70.0
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.8e-171 606.3 412 74.3
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.0e-170 602.8 413 69.7
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 7.8e-167 590.9 426 69.2
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 6.6e-166 587.8 435 66.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 6.6e-166 587.8 416 69.7
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 2.1e-164 582.8 423 70.7
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 8.1e-164 580.9 412 68.9
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.1e-163 578.9 422 68.5
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 3.4e-162 575.5 413 70.7
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.9e-161 572.4 417 72.9
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 4.9e-161 571.6 351 79.8
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.2e-159 567.0 412 67.2
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.6e-159 566.6 416 67.5
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 3.5e-159 565.5 416 68.8
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 6.0e-159 564.7 413 65.4
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 6.0e-159 564.7 414 65.2
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 7.8e-159 564.3 411 65.9
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 7.8e-159 564.3 396 72.2
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.3e-158 563.5 413 65.1
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 2.3e-158 562.8 413 67.1
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 5.1e-158 561.6 413 65.6
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 9.6e-157 557.4 412 65.5
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 9.6e-157 557.4 413 64.6
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.1e-156 556.2 379 73.4
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 2.8e-156 555.8 399 72.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 9.0e-155 550.8 329 80.2
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.5e-154 550.1 424 63.4
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 3.4e-154 548.9 414 63.8
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 3.4e-154 548.9 411 64.5
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 5.4e-152 541.6 413 63.7
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 7.1e-152 541.2 430 66.7
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.1e-149 533.9 447 62.0
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.6e-148 530.0 423 63.1
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 9.0e-147 524.2 419 66.8
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.2e-146 523.9 402 68.7
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.9e-144 516.5 414 64.3
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 6.0e-143 511.5 397 63.2
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.3e-142 510.4 415 63.9
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.7e-142 507.7 421 61.8
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 3.3e-141 505.8 424 60.8
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 3.1e-139 499.2 407 63.1
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 2.7e-135 486.1 394 59.6
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 5.1e-134 481.9 405 60.7
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 4.5e-130 468.8 329 71.1
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 5.5e-120 435.3 263 80.2
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 9.7e-109 397.9 421 52.0
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 1.8e-107 393.7 293 68.9
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 5.3e-99 365.5 416 46.4
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.7e-95 352.4 370 52.4
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 9.8e-93 344.7 218 72.0
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.9e-88 330.5 416 43.8
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.5e-85 320.9 320 54.4
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 7.3e-80 302.0 426 41.8
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.4e-78 297.7 199 69.3
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.0e-77 293.9 300 52.7
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.1e-58 230.7 166 65.7
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.3e-57 227.3 130 82.3
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 5.2e-54 216.1 148 69.6
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 1.5e-53 214.5 135 71.1
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 4.6e-50 203.0 223 47.5
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.1e-43 179.1 133 66.9
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.7e-41 174.5 133 65.4
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 7.3e-40 169.1 98 77.6
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.5e-32 144.1 82 89.0
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 8.1e-31 139.0 134 56.7
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 3.8e-28 130.2 92 77.2
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 3.3e-24 117.1 123 52.8
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 3.7e-15 87.0 53 66.0
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 9.0e-14 82.4 78 56.4
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.8e-12 77.0 54 61.1


User provided reference genes

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