Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.4e-49 199.1 88 100.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 5.4e-46 187.2 88 92.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 7.1e-46 186.8 88 92.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.6e-45 185.7 88 90.9
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.6e-45 185.7 88 90.9
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.6e-45 185.7 88 90.9
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 2.7e-45 184.9 88 92.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 1.0e-44 183.0 88 88.6
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 1.0e-44 183.0 88 89.8
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 2.3e-44 181.8 88 89.8
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 3.9e-44 181.0 88 89.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 3.9e-44 181.0 88 87.5
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 8.7e-44 179.9 88 87.5
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.9e-43 178.7 88 88.6
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 3.3e-43 177.9 88 87.5
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 4.3e-43 177.6 88 88.6
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.6e-43 177.2 88 87.5
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 9.6e-43 176.4 88 86.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 2.1e-42 175.3 88 88.6
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 4.8e-42 174.1 88 86.4
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 4.8e-42 174.1 88 86.4
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 4.8e-42 174.1 88 86.4
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 8.1e-42 173.3 88 85.2
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.1e-41 172.9 88 85.2
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 1.1e-41 172.9 88 85.2
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 1.4e-41 172.6 88 86.4
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 3.1e-41 171.4 85 85.9
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 4.0e-41 171.0 88 85.2
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 6.9e-41 170.2 88 87.5
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 6.9e-41 170.2 80 91.2
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.2e-40 169.5 88 83.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.2e-40 169.5 88 83.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.5e-40 169.1 88 81.8
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.5e-40 169.1 88 87.5
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 2.0e-40 168.7 88 83.0
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.0e-40 168.7 88 81.8
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.6e-40 168.3 88 86.4
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 2.6e-40 168.3 88 84.1
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 3.4e-40 167.9 88 86.4
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 3.4e-40 167.9 88 86.4
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 3.4e-40 167.9 88 80.7
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 4.5e-40 167.5 88 86.4
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 4.5e-40 167.5 88 80.7
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 5.8e-40 167.2 88 85.2
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 5.8e-40 167.2 88 83.0
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 5.8e-40 167.2 88 81.8
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 4.9e-39 164.1 88 79.5
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 4.9e-39 164.1 88 79.5
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 6.4e-39 163.7 88 83.0
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.1e-38 162.9 88 81.8
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.4e-38 162.5 88 81.8
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.4e-38 162.5 88 79.5
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.4e-38 162.5 88 80.7
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.4e-38 162.5 88 80.7
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.4e-38 161.8 88 79.5
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 4.2e-38 161.0 88 80.7
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 4.2e-38 161.0 88 80.7
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 5.4e-38 160.6 88 78.4
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 7.1e-38 160.2 88 77.3
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.6e-37 159.1 88 77.3
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.1e-37 158.7 88 76.1
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.1e-37 158.7 88 78.4
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.3e-36 156.0 80 81.2
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 3.0e-36 154.8 88 76.1
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 3.0e-36 154.8 88 76.1
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 6.7e-36 153.7 88 77.3
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 1.5e-35 152.5 88 73.9
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 7.4e-35 150.2 88 71.6
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 9.6e-35 149.8 88 71.6
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 3.7e-34 147.9 88 70.5
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 8.1e-34 146.7 122 57.4
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.4e-33 145.2 88 72.7
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 2.0e-32 142.1 88 68.2
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 3.4e-32 141.4 88 67.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 7.6e-32 140.2 88 67.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 2.2e-31 138.7 80 72.5
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 2.2e-31 138.7 80 72.5
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.8e-31 137.9 88 72.7
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.8e-31 137.9 88 72.7
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 1.4e-30 136.0 76 81.6
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 5.5e-30 134.0 67 86.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 6.0e-29 130.6 89 64.0
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 1.0e-28 129.8 150 46.0
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.3e-28 129.4 80 65.0
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 3.9e-28 127.9 99 59.6
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 6.7e-28 127.1 80 63.8
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.1e-25 119.8 89 59.6
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 2.4e-25 118.6 89 59.6
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.0e-23 113.2 58 86.2
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 2.5e-22 108.6 89 55.1
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 1.1e-19 99.8 89 51.7
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 6.3e-18 94.0 90 52.2
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 5.1e-12 74.3 41 78.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.5e-11 72.8 88 39.8
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-10 69.3 31 93.5
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 1.4e-06 56.2 76 34.2
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 3.2e-06 55.1 76 31.6
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 5.5e-06 54.3 76 32.9


User provided reference genes

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