Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.6e-114 416.0 194 100.0
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.4e-91 339.7 185 81.6
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.8e-89 332.8 193 76.2
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 5.1e-89 331.3 185 80.5
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 5.1e-89 331.3 182 80.8
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.0e-88 329.3 187 80.2
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.7e-87 326.2 189 76.2
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.7e-87 326.2 185 78.9
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 6.3e-87 324.3 185 77.8
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 1.1e-86 323.6 187 75.9
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.4e-86 323.2 193 76.7
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.4e-86 323.2 192 75.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.8e-86 322.8 185 77.3
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 4.1e-86 321.6 193 75.1
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 5.3e-86 321.2 185 78.4
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.0e-85 319.3 187 77.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 2.0e-85 319.3 187 76.5
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.5e-85 318.2 187 77.0
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 5.9e-85 317.8 183 76.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 7.7e-85 317.4 187 77.0
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.3e-84 316.6 187 77.0
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.2e-84 315.8 183 74.9
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.8e-84 315.1 187 77.0
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.8e-84 315.1 185 76.2
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.0e-84 314.7 184 76.1
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 5.0e-84 314.7 180 76.7
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.5e-84 314.3 187 76.5
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.4e-83 313.2 185 77.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 9.4e-83 310.5 183 74.9
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.2e-82 310.1 193 74.6
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.6e-82 309.7 183 76.5
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.6e-82 309.7 194 73.7
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 2.1e-82 309.3 183 74.3
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 2.1e-82 309.3 187 75.4
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.1e-82 309.3 194 74.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 2.7e-82 308.9 194 73.7
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.7e-82 308.1 183 75.4
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.0e-81 307.0 188 73.9
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 3.0e-81 305.4 181 74.0
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 6.7e-81 304.3 183 73.2
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.1e-80 303.5 185 73.0
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 2.0e-80 302.8 185 73.5
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 3.3e-80 302.0 194 72.7
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 4.4e-80 301.6 183 71.6
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 5.7e-80 301.2 183 71.6
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.7e-80 301.2 193 72.5
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 5.7e-80 301.2 180 76.7
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.7e-80 300.4 193 73.1
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.7e-79 299.7 183 71.0
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.2e-79 299.3 193 71.5
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 2.2e-79 299.3 189 69.3
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.1e-78 297.0 233 60.5
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.8e-78 296.2 183 71.6
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.1e-78 295.0 193 70.5
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 1.6e-77 293.1 183 73.8
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 1.6e-77 293.1 184 71.2
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 2.0e-77 292.7 180 71.7
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 2.6e-77 292.4 184 70.7
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 4.5e-77 291.6 183 72.1
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.0e-76 290.4 183 68.9
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.0e-76 290.4 184 70.1
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.7e-76 289.7 184 68.5
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 2.9e-76 288.9 184 67.9
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.8e-76 288.5 207 67.1
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.9e-75 286.2 188 69.7
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 3.2e-75 285.4 191 68.1
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.1e-74 282.7 181 69.6
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 3.6e-74 282.0 184 66.3
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 5.2e-73 278.1 187 69.5
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 8.8e-73 277.3 193 64.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.1e-72 276.9 184 67.9
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 3.3e-72 275.4 183 66.7
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 9.7e-72 273.9 186 69.4
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 4.8e-71 271.6 183 66.1
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 4.8e-71 271.6 187 66.3
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.4e-70 270.0 228 58.3
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.8e-70 269.6 187 65.8
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.8e-70 269.6 192 64.6
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 3.1e-70 268.9 188 62.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 2.0e-69 266.2 188 61.2
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 4.5e-69 265.0 180 63.9
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.9e-67 259.6 180 63.3
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 7.2e-67 257.7 186 65.6
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 9.4e-67 257.3 180 63.9
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.6e-64 249.2 178 60.1
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.4e-64 248.4 178 60.7
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 2.0e-61 239.6 187 63.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 8.5e-60 234.2 182 54.9
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.2e-56 223.8 183 52.5
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 5.7e-56 221.5 125 77.6
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 7.5e-56 221.1 184 56.5
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.7e-55 219.9 201 48.8
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.8e-55 219.2 125 76.8
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.1e-54 215.7 126 75.4
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.0e-53 213.0 127 74.8
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.1e-51 207.2 126 69.0
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.9e-51 206.5 126 73.0
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 2.1e-50 203.0 174 52.3
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.1e-50 203.0 173 52.6
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 8.0e-50 201.1 177 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.3e-49 199.5 177 48.6
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.9e-47 192.6 131 67.2
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 2.9e-47 192.6 127 64.6
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.4e-46 188.3 158 50.6
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 2.0e-45 186.4 109 73.4
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.2e-40 170.6 126 54.8
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.4e-40 168.7 122 64.8
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 6.4e-39 164.9 124 51.6
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 1.4e-33 147.1 177 38.4
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 6.4e-31 138.3 125 51.2
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 4.9e-23 112.1 241 28.6
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 7.8e-21 104.8 74 66.2
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.3e-11 72.8 52 67.3
arahy.Tifrunner.gnm1.ann1.9L1IQQ Arachis hypogaea HOM05D001866 ORTHO05D001915 4.2e-06 55.8 100 33.0


User provided reference genes

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