Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 1.3e-188 662.9 336 100.0
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 4.2e-115 418.7 350 60.3
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 2.1e-114 416.4 339 62.5
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.4e-113 413.7 340 63.2
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 3.4e-112 409.1 336 61.3
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 7.5e-112 407.9 343 62.1
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 3.1e-110 402.5 335 61.2
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.2e-109 400.6 339 60.8
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 2.0e-109 399.8 340 58.5
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 2.0e-109 399.8 338 60.7
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 2.7e-109 399.4 345 59.4
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.0e-108 397.5 340 60.0
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 3.8e-108 395.6 344 57.8
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.5e-107 393.7 341 58.7
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.5e-107 393.7 347 56.8
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 3.3e-107 392.5 343 57.7
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 2.8e-106 389.4 347 57.3
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 2.3e-105 386.3 337 59.3
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 8.9e-105 384.4 335 57.9
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.2e-104 384.0 337 59.3
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.5e-104 383.6 337 59.1
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 4.4e-104 382.1 338 57.7
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.7e-104 381.7 333 58.0
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 2.2e-103 379.8 292 64.0
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 4.9e-103 378.6 335 57.3
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 8.3e-103 377.9 341 58.1
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.8e-102 376.7 336 57.7
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 7.0e-102 374.8 335 55.8
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 9.2e-102 374.4 336 58.6
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 4.5e-101 372.1 335 56.4
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.0e-100 370.9 333 56.8
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 1.3e-100 370.5 340 57.1
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 2.3e-100 369.8 336 56.2
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 2.9e-100 369.4 344 57.0
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 5.0e-100 368.6 334 56.0
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 5.0e-100 368.6 336 56.0
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 8.6e-100 367.9 357 54.3
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 2.5e-99 366.3 335 56.4
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 2.5e-99 366.3 334 56.6
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.5e-99 366.3 335 57.3
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.3e-99 365.5 344 54.9
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 7.3e-99 364.8 334 56.3
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.2e-98 364.0 336 55.7
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 1.6e-98 363.6 354 54.0
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.6e-98 363.6 337 55.8
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.1e-98 363.2 336 56.8
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 3.6e-98 362.5 355 53.8
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 4.7e-98 362.1 357 52.9
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 6.1e-98 361.7 334 55.4
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 1.4e-97 360.5 335 54.9
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.8e-97 360.1 332 56.6
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 1.8e-97 360.1 335 54.9
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.5e-96 357.1 348 54.9
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 7.5e-96 354.8 335 53.7
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.7e-95 353.6 335 54.3
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 6.4e-95 351.7 335 54.9
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 3.2e-94 349.4 301 58.5
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 7.0e-94 348.2 336 53.6
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 7.0e-94 348.2 343 54.5
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 9.2e-94 347.8 253 65.6
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.3e-92 344.0 342 54.4
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.3e-92 344.0 304 56.2
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.7e-92 343.6 291 58.1
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.1e-91 340.9 344 53.2
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.5e-91 340.5 344 53.2
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.9e-91 340.1 338 53.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 4.3e-91 339.0 338 52.1
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 5.6e-91 338.6 344 52.6
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 7.3e-91 338.2 343 52.8
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 7.3e-91 338.2 337 52.8
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.2e-90 337.4 345 53.9
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.8e-90 336.3 341 53.7
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 4.7e-90 335.5 343 52.2
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 6.2e-90 335.1 340 53.5
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 1.4e-89 334.0 340 52.9
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.5e-88 330.5 345 51.9
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.6e-88 329.7 295 56.3
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 4.4e-88 328.9 383 48.0
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 4.4e-88 328.9 337 50.4
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.1e-86 324.3 358 49.7
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 1.6e-85 320.5 339 50.1
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 1.6e-85 320.5 336 50.3
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 2.1e-85 320.1 297 52.9
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 1.3e-84 317.4 306 51.3
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.1e-83 314.3 352 49.4
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.2e-82 310.8 272 59.9
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.2e-82 310.8 360 48.3
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 3.6e-82 309.3 301 55.5
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 8.1e-82 308.1 355 47.6
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 3.1e-81 306.2 361 51.2
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 3.7e-79 299.3 342 48.8
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 3.7e-79 299.3 354 48.3
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 4.9e-79 298.9 350 48.0
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 6.4e-79 298.5 360 50.0
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 5.4e-78 295.4 386 45.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.2e-78 294.7 334 49.1
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 7.8e-77 291.6 354 48.0
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.7e-76 290.4 347 49.0
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 2.3e-76 290.0 366 48.4
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 6.2e-74 282.0 344 45.9
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 2.4e-62 243.4 210 55.7
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 1.3e-58 231.1 193 57.5
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 5.6e-51 205.7 165 58.8
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.8e-49 200.7 298 39.9
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 5.8e-48 195.7 251 38.2
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 5.8e-48 195.7 298 39.6
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.4e-46 191.0 368 37.2
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 5.5e-46 189.1 364 37.1
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 5.3e-41 172.6 223 38.1
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.9e-41 172.2 205 42.9
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.5e-40 171.0 231 43.7
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.5e-38 163.7 206 43.2
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.1e-38 162.2 201 43.3
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.1e-37 160.6 205 40.0
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.1e-37 160.6 199 42.2
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-37 160.2 208 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.0e-36 158.3 207 40.6
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.7e-36 155.2 209 41.1
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 7.4e-35 152.1 312 33.3
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.2e-29 134.8 346 29.2
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.0e-24 117.5 109 54.1
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 3.8e-23 113.2 171 39.2
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.2e-22 110.2 109 54.1
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.4e-20 104.8 112 46.4
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 5.7e-19 99.4 80 56.2
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.1e-09 68.6 88 47.7


User provided reference genes

Program Settings