Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc551.2 Carica papaya HOM05D000621 ORTHO05D000421 5.7e-29 130.2 64 100.0
Cpa.g.c34571 Carica papaya HOM05D000621 ORTHO05D000421 6.6e-25 116.7 57 96.5
Cpa.g.sc52.173 Carica papaya HOM05D000621 ORTHO05D000421 1.5e-24 115.5 57 98.2
Cpa.g.c45528 Carica papaya HOM05D000621 ORTHO05D000421 8.6e-17 89.7 55 78.2
Cpa.g.sc52.171 Carica papaya HOM05D000621 ORTHO05D000421 8.0e-15 83.2 59 67.8
Cpa.g.sc52.172 Carica papaya HOM05D000621 ORTHO05D000421 8.0e-15 83.2 55 72.7
Cpa.g.sc551.3 Carica papaya HOM05D000621 ORTHO05D000421 2.3e-14 81.6 55 69.1
Cpa.g.sc693.1 Carica papaya HOM05D000621 ORTHO05D000421 4.4e-13 77.4 55 63.6
Cpa.g.sc693.2 Carica papaya HOM05D000621 ORTHO05D000421 7.5e-13 76.6 55 65.5
Dinv08798 Davidia involucrata HOM05D000621 ORTHO05D000421 1.1e-11 72.8 58 55.2
Manes.09G128200 Manihot esculenta HOM05D000621 ORTHO05D000421 4.1e-11 70.9 58 50.0
Cpa.g.sc551.1 Carica papaya HOM05D000621 ORTHO05D000421 9.2e-11 69.7 55 58.2
Cpa.g.c43820 Carica papaya HOM05D000621 ORTHO05D000421 1.2e-10 69.3 55 60.0
CSS0007912 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 3.0e-09 64.7 58 48.3
VMungo1127G0414 Vigna mungo HOM05D000621 ORTHO05D000421 5.0e-09 63.9 54 53.7
Lsat_1_v5_gn_2_72140 Lactuca sativa HOM05D000621 ORTHO05D000421 6.6e-09 63.5 58 41.4
CAN.G456.2 Capsicum annuum HOM05D000621 ORTHO05D000421 1.1e-08 62.8 54 55.6
Oeu020921.1 Olea europaea HOM05D000621 ORTHO05D000421 1.1e-08 62.8 58 48.3
TPR.G5408 Trifolium pratense HOM05D000621 ORTHO05D000421 1.1e-08 62.8 52 53.8
Aa31LG1G7340 Aethionema arabicum HOM05D000621 ORTHO05D000421 1.9e-08 62.0 60 51.7
Ca_02028_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 1.9e-08 62.0 52 50.0
Psat0s3389g0040 Pisum sativum HOM05D000621 ORTHO05D000421 1.9e-08 62.0 52 53.8
PGSC0003DMG402020444 Solanum tuberosum HOM05D000621 ORTHO05D000421 2.5e-08 61.6 54 53.7
Eucgr.J01526 Eucalyptus grandis HOM05D000621 ORTHO05D000421 3.3e-08 61.2 55 49.1
Medtr4g079830 Medicago truncatula HOM05D000621 ORTHO05D000421 4.3e-08 60.8 52 50.0
SalBow7G2455 Salvia bowleyana HOM05D000621 ORTHO05D000421 4.3e-08 60.8 57 45.6
Ca_18110_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 9.5e-08 59.7 48 56.2
Ca_18874_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 9.5e-08 59.7 48 56.2
Ca_28221_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 9.5e-08 59.7 48 56.2
Psat7g165520 Pisum sativum HOM05D000621 ORTHO05D000421 9.5e-08 59.7 58 43.1
Psat7g165560 Pisum sativum HOM05D000621 ORTHO05D000421 9.5e-08 59.7 58 43.1
TPR.G22463 Trifolium pratense HOM05D000621 ORTHO05D000421 9.5e-08 59.7 52 48.1
Nitab4.5_0010988g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.2e-07 59.3 54 51.9
Duzib128G0876 Durio zibethinus HOM05D000621 ORTHO05D000421 2.1e-07 58.5 58 51.7
Cfa007381 Carpinus fangiana HOM05D000621 ORTHO05D000421 2.8e-07 58.2 55 50.9
Psat7g252320 Pisum sativum HOM05D000621 ORTHO05D000421 2.8e-07 58.2 55 45.5
Solyc07g055040.1 Solanum lycopersicum HOM05D000621 ORTHO05D000421 2.8e-07 58.2 54 51.9
Sopen07g027170 Solanum pennellii HOM05D000621 ORTHO05D000421 2.8e-07 58.2 54 51.9
COL.COLO4_14820 Corchorus olitorius HOM05D000621 ORTHO05D000421 3.6e-07 57.8 45 53.3
Lalb_Chr01g0005991 Lupinus albus HOM05D000621 ORTHO05D000421 3.6e-07 57.8 49 53.1
Nn1g04409 Nelumbo nucifera HOM05D000621 ORTHO05D000421 3.6e-07 57.8 55 49.1
Nitab4.5_0018880g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 3.6e-07 57.8 57 45.6
Phvul.011G130600 Phaseolus vulgaris HOM05D000621 ORTHO05D000421 3.6e-07 57.8 54 48.1
Phvul.011G130700 Phaseolus vulgaris HOM05D000621 ORTHO05D000421 3.6e-07 57.8 54 48.1
Sopen06g028520 Solanum pennellii HOM05D000621 ORTHO05D000421 3.6e-07 57.8 58 44.8
Actinidia35214 Actinidia chinensis HOM05D000621 ORTHO05D000421 4.7e-07 57.4 55 43.6
ATR0691G208 Amborella trichopoda HOM05D000621 ORTHO05D000421 4.7e-07 57.4 54 44.4
Lsat_1_v5_gn_8_139620 Lactuca sativa HOM05D000621 ORTHO05D000421 4.7e-07 57.4 58 37.9
Lalb_Chr03g0029901 Lupinus albus HOM05D000621 ORTHO05D000421 6.2e-07 57.0 49 53.1
SGA_v2.0_scaffold9G04815 Striga asiatica HOM05D000621 ORTHO05D000421 6.2e-07 57.0 56 42.9
Thecc.05G041100 Theobroma cacao HOM05D000621 ORTHO05D000421 6.2e-07 57.0 54 51.9
VMungo0251G1194 Vigna mungo HOM05D000621 ORTHO05D000421 6.2e-07 57.0 53 49.1
Haze_14728 Corylus avellana HOM05D000621 ORTHO05D000421 8.1e-07 56.6 50 52.0
Nitab4.5_0000537g0090 Nicotiana tabacum HOM05D000621 ORTHO05D000421 8.1e-07 56.6 55 49.1
Nitab4.5_0001095g0120 Nicotiana tabacum HOM05D000621 ORTHO05D000421 8.1e-07 56.6 54 50.0
QL08p041697 Quercus lobata HOM05D000621 ORTHO05D000421 8.1e-07 56.6 56 51.8
Aqoxy6G00212 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 1.1e-06 56.2 55 49.1
Ca_18882_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 1.1e-06 56.2 53 50.9
Nitab4.5_0007872g0030 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.1e-06 56.2 57 43.9
PGSC0003DMG400026947 Solanum tuberosum HOM05D000621 ORTHO05D000421 1.1e-06 56.2 58 41.4
CAN.G456.16 Capsicum annuum HOM05D000621 ORTHO05D000421 1.4e-06 55.8 58 43.1
Cc05_g08330 Coffea canephora HOM05D000621 ORTHO05D000421 1.4e-06 55.8 55 41.8
FvH4_2g23230 Fragaria vesca HOM05D000621 ORTHO05D000421 1.4e-06 55.8 53 50.9
FAN24G2994 Fragaria x ananassa HOM05D000621 ORTHO05D000421 1.4e-06 55.8 53 50.9
Medtr4g079980 Medicago truncatula HOM05D000621 ORTHO05D000421 1.4e-06 55.8 56 42.9
CSS0036864 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 1.8e-06 55.5 56 39.3
Nitab4.5_0018490g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.8e-06 55.5 55 47.3
Oeu018754.1 Olea europaea HOM05D000621 ORTHO05D000421 1.8e-06 55.5 57 50.9
Phvul.002G204200 Phaseolus vulgaris HOM05D000621 ORTHO05D000421 1.8e-06 55.5 53 47.2
Sopen06g035620 Solanum pennellii HOM05D000621 ORTHO05D000421 1.8e-06 55.5 52 48.1
Aqoxy1G02364 Aquilegia oxysepala HOM05D000621 ORTHO05D000421 2.3e-06 55.1 56 48.2
FAN27G1190 Fragaria x ananassa HOM05D000621 ORTHO05D000421 2.3e-06 55.1 53 50.9
Medtr5g089140 Medicago truncatula HOM05D000621 ORTHO05D000421 2.3e-06 55.1 52 44.2
Medtr5g089250 Medicago truncatula HOM05D000621 ORTHO05D000421 2.3e-06 55.1 52 44.2
Solyc03g120030.1 Solanum lycopersicum HOM05D000621 ORTHO05D000421 2.3e-06 55.1 53 47.2
COL.COLO4_15144 Corchorus olitorius HOM05D000621 ORTHO05D000421 3.1e-06 54.7 56 42.9
FAN15G1106 Fragaria x ananassa HOM05D000621 ORTHO05D000421 3.1e-06 54.7 53 49.1
Glyma.12G127600 Glycine max HOM05D000621 ORTHO05D000421 3.1e-06 54.7 53 49.1
Peaxi162Scf00469g00022 Petunia axillaris HOM05D000621 ORTHO05D000421 3.1e-06 54.7 54 46.3
Lalb_Chr21g0310171 Lupinus albus HOM05D000621 ORTHO05D000421 4.0e-06 54.3 53 47.2
Potri.009G151200 Populus trichocarpa HOM05D000621 ORTHO05D000421 4.0e-06 54.3 58 43.1
Sopen03g038910 Solanum pennellii HOM05D000621 ORTHO05D000421 4.0e-06 54.3 53 47.2
CAN.G65.95 Capsicum annuum HOM05D000621 ORTHO05D000421 5.2e-06 53.9 57 42.1
Ca_00956_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 5.2e-06 53.9 53 45.3
Cc05_g08320 Coffea canephora HOM05D000621 ORTHO05D000421 5.2e-06 53.9 53 45.3
Cc05_g11190 Coffea canephora HOM05D000621 ORTHO05D000421 5.2e-06 53.9 60 38.3
Medtr3g065560 Medicago truncatula HOM05D000621 ORTHO05D000421 5.2e-06 53.9 58 39.7
Medtr5g089220 Medicago truncatula HOM05D000621 ORTHO05D000421 5.2e-06 53.9 52 42.3
QL06p013123 Quercus lobata HOM05D000621 ORTHO05D000421 5.2e-06 53.9 53 49.1
CAN.G65.66 Capsicum annuum HOM05D000621 ORTHO05D000421 6.8e-06 53.5 57 40.4
Ciclev10018775m.g Citrus clementina HOM05D000621 ORTHO05D000421 6.8e-06 53.5 60 43.3
FAN20G0060 Fragaria x ananassa HOM05D000621 ORTHO05D000421 6.8e-06 53.5 53 49.1
Sopen06g028500 Solanum pennellii HOM05D000621 ORTHO05D000421 6.8e-06 53.5 58 41.4
COL.COLO4_23189 Corchorus olitorius HOM05D000621 ORTHO05D000421 8.9e-06 53.1 58 44.8
VMungo0251G0507 Vigna mungo HOM05D000366 ORTHO05D000437 8.9e-06 53.1 50 46.0


User provided reference genes

Program Settings