Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.8e-116 422.5 211 100.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 4.6e-99 364.8 207 85.5
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 6.0e-99 364.4 207 84.5
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.3e-98 362.5 210 84.3
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 3.0e-98 362.1 210 84.3
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.5e-97 359.8 210 82.9
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.5e-97 359.8 207 85.0
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 3.3e-97 358.6 207 84.5
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 3.3e-97 358.6 206 84.5
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 7.3e-97 357.5 206 84.0
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 7.3e-97 357.5 206 84.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 6.2e-96 354.4 206 83.0
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.1e-95 353.6 202 84.2
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 1.4e-95 353.2 206 83.5
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.4e-95 353.2 210 80.5
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.8e-95 352.8 210 82.4
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.8e-95 352.8 206 82.5
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 3.1e-95 352.1 211 81.5
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 1.5e-94 349.7 200 83.5
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.5e-94 349.7 210 79.0
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 2.6e-94 349.0 205 82.4
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.6e-94 349.0 207 82.1
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 7.5e-94 347.4 205 80.5
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.7e-93 346.3 211 78.2
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.9e-93 345.5 205 80.0
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 3.7e-93 345.1 206 81.1
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 4.9e-93 344.7 201 83.1
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 4.9e-93 344.7 207 82.1
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 6.4e-93 344.4 197 83.2
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 6.4e-93 344.4 200 82.5
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.1e-92 343.6 199 81.9
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 1.4e-92 343.2 206 79.1
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 5.4e-92 341.3 199 80.9
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 5.4e-92 341.3 205 79.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 7.1e-92 340.9 188 88.3
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.1e-92 340.9 207 79.7
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 9.2e-92 340.5 197 84.3
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 2.1e-91 339.3 195 83.6
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.7e-91 339.0 195 83.6
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 4.6e-91 338.2 207 77.8
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 6.0e-91 337.8 195 82.6
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 6.0e-91 337.8 197 80.2
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 7.8e-91 337.4 195 82.1
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.8e-91 337.4 198 82.3
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.7e-90 336.3 198 82.3
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 3.0e-90 335.5 206 76.7
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 8.6e-90 334.0 197 79.7
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 8.6e-90 334.0 204 78.4
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.9e-89 332.8 199 79.9
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 4.3e-89 331.6 197 80.7
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 5.6e-89 331.3 197 80.7
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 7.3e-89 330.9 207 76.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.2e-88 330.1 197 81.2
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.6e-88 329.7 207 75.8
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.1e-88 329.3 211 76.3
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 3.6e-88 328.6 195 80.0
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 4.7e-88 328.2 207 78.3
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 6.2e-88 327.8 195 81.0
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 8.1e-88 327.4 206 75.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.4e-87 326.6 205 77.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.8e-87 326.2 197 79.2
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.3e-87 325.9 193 81.3
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 3.1e-87 325.5 206 76.2
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.6e-86 322.4 197 77.2
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.6e-86 322.4 205 76.1
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 3.4e-86 322.0 206 76.7
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 3.4e-86 322.0 206 76.7
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 7.6e-86 320.9 198 79.3
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 9.9e-86 320.5 207 74.4
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 9.9e-86 320.5 204 74.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.3e-85 320.1 206 76.2
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.3e-85 320.1 207 75.4
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.7e-85 319.7 206 76.2
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 2.2e-85 319.3 206 76.2
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 4.9e-85 318.2 205 75.1
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 4.9e-85 318.2 211 74.9
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 6.4e-85 317.8 210 72.4
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 8.3e-85 317.4 197 75.6
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.2e-83 313.5 195 76.4
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 2.7e-83 312.4 195 74.9
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 3.9e-82 308.5 195 76.4
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.5e-81 306.6 206 74.3
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 5.6e-81 304.7 203 72.4
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.4e-79 300.1 205 69.3
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.8e-79 299.7 200 74.0
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.5e-78 296.6 181 80.7
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 9.9e-78 293.9 176 82.4
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 5.1e-74 281.6 206 65.5
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.9e-73 279.6 195 66.2
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.8e-72 275.8 192 66.7
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 2.5e-65 252.7 191 62.3
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.2e-61 239.6 147 78.9
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.0e-58 230.7 137 82.5
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.3e-58 230.3 129 86.0
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 3.3e-57 225.7 231 54.5
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.4e-54 215.7 231 53.7
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 4.5e-54 215.3 144 76.4
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.1e-50 201.8 159 63.5
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.4e-47 193.0 187 51.3
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.2e-45 186.4 241 47.3
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 2.7e-43 179.5 156 57.1
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 6.7e-42 174.9 183 47.5
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.3e-41 172.2 130 63.8
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.2e-38 164.1 95 78.9
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 1.5e-38 163.7 105 77.1
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.9e-36 156.8 93 83.9
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.1e-35 153.3 112 67.0
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 3.3e-33 146.0 188 43.1
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.7e-32 143.7 189 42.9
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.2e-32 143.3 102 74.5
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.2e-32 143.3 98 68.4
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.4e-31 140.6 121 57.9
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 4.5e-30 135.6 134 59.7
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.9e-29 132.9 144 44.4
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 8.5e-21 104.8 68 70.6
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 5.5e-20 102.1 69 62.3
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 3.6e-19 99.4 52 88.5
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 9.1e-15 84.7 51 74.5
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 8.5e-13 78.2 55 63.6
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.9e-12 77.0 60 61.7
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.4e-12 74.7 51 66.7
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.7e-11 73.2 64 54.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.7e-08 63.9 68 52.9
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 3.7e-08 62.8 43 69.8
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 8.3e-08 61.6 53 58.5


User provided reference genes

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