Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 3.4e-124 448.4 231 100.0
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 4.9e-30 135.6 96 81.2
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.5e-28 129.4 92 79.3
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 4.6e-28 129.0 96 76.0
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 8.7e-27 124.8 92 77.2
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 2.5e-26 123.2 93 78.5
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.8e-25 119.8 96 72.9
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.8e-25 119.8 96 72.9
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 4.8e-25 119.0 96 72.9
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.8e-24 117.1 95 71.6
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.4e-24 116.7 92 72.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 2.4e-24 116.7 97 73.2
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 5.8e-23 112.1 96 70.8
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 7.6e-23 111.7 96 69.8
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.7e-22 110.5 101 68.3
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.1e-21 107.8 96 66.7
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 5.5e-21 105.5 95 67.4
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 7.1e-21 105.1 97 67.0
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 7.1e-21 105.1 92 66.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 7.1e-21 105.1 94 69.1
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 2.1e-20 103.6 92 66.3
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 2.1e-20 103.6 94 68.1
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 2.7e-20 103.2 93 65.6
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.7e-20 103.2 93 65.6
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.7e-20 103.2 93 65.6
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.7e-20 103.2 93 65.6
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 2.7e-20 103.2 98 66.3
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 3.5e-20 102.8 92 64.1
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 6.0e-20 102.1 95 66.3
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 7.9e-20 101.7 92 65.2
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 7.9e-20 101.7 101 65.3
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.3e-19 100.9 113 61.1
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.3e-19 100.9 93 62.4
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.3e-19 100.9 94 66.0
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 1.3e-19 100.9 95 65.3
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.3e-19 100.1 92 63.0
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.3e-19 100.1 92 63.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 5.1e-19 99.0 92 64.1
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 8.7e-19 98.2 96 64.6
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.1e-18 97.8 96 61.5
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-18 97.4 97 64.9
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-18 97.4 97 64.9
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.5e-18 97.4 104 58.7
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.9e-18 97.1 87 66.7
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.9e-18 97.1 87 66.7
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 5.6e-18 95.5 98 60.2
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.2e-17 92.0 86 64.0
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 6.2e-17 92.0 80 62.5
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 2.4e-16 90.1 104 52.9
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.4e-16 90.1 96 56.2
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 3.1e-16 89.7 92 60.9
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 4.0e-16 89.4 92 60.9
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 6.9e-16 88.6 86 61.6
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 9.0e-16 88.2 94 59.6
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.2e-15 87.8 64 82.8
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 2.0e-15 87.0 99 56.6
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.0e-15 87.0 68 70.6
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 2.0e-15 87.0 104 53.8
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 2.6e-15 86.7 87 60.9
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 3.4e-15 86.3 92 63.0
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 7.6e-15 85.1 95 57.9
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.7e-14 84.0 95 53.7
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 2.2e-14 83.6 92 56.5
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 8.4e-14 81.6 83 63.9
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.4e-13 80.9 98 56.1
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 1.4e-13 80.9 67 68.7
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.9e-13 80.5 69 66.7
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 7.1e-13 78.6 64 68.8
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 7.1e-13 78.6 54 81.5
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.6e-12 77.4 98 52.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.6e-12 77.4 94 50.0
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.1e-12 77.0 92 52.2
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.8e-11 73.9 101 50.5
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 8.7e-11 71.6 94 46.8
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 4.8e-09 65.9 50 74.0
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 8.2e-09 65.1 102 49.0
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 3.8e-06 56.2 112 45.5


User provided reference genes

Program Settings