Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 0.0e+00 1360.5 681 100.0
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 3.9e-176 622.5 645 53.6
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 5.1e-176 622.1 639 52.3
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.8e-174 616.3 639 50.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 3.7e-174 615.9 648 52.6
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.4e-173 614.0 639 50.2
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 5.3e-173 612.1 640 51.7
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.5e-172 610.5 637 52.1
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 2.6e-172 609.8 638 52.7
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 7.6e-172 608.2 639 50.4
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 1.0e-171 607.8 609 52.7
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 3.8e-171 605.9 641 54.0
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 5.0e-171 605.5 644 52.3
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.9e-170 603.6 642 50.6
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 4.6e-169 599.0 589 54.7
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 1.5e-167 594.0 637 52.1
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 6.1e-161 572.0 611 51.1
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.5e-159 567.4 635 50.1
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 1.6e-153 547.4 637 48.8
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 6.7e-152 542.0 639 47.1
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 3.3e-151 539.7 606 47.7
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.3e-150 537.7 635 48.3
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 2.8e-150 536.6 622 48.6
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 1.4e-149 534.3 635 47.1
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.8e-149 533.9 643 47.4
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.5e-148 529.3 619 48.6
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.9e-146 523.9 628 48.1
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.1e-145 520.4 616 49.0
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.0e-144 518.1 563 49.7
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.4e-144 517.7 639 47.4
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.8e-144 517.3 629 47.4
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 3.0e-144 516.5 629 47.4
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 5.2e-144 515.8 616 48.7
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 7.5e-143 511.9 611 48.4
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 2.4e-141 506.9 639 47.6
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.1e-141 506.1 604 48.0
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.1e-138 498.0 553 51.2
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 2.1e-137 493.8 595 45.4
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 2.2e-134 483.8 601 46.4
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 8.3e-134 481.9 606 45.9
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 9.1e-133 478.4 639 44.8
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 3.5e-132 476.5 606 45.4
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 3.5e-132 476.5 625 44.0
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 1.7e-131 474.2 616 44.8
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.7e-131 474.2 598 44.6
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 3.8e-131 473.0 608 45.4
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 3.2e-130 469.9 574 48.4
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.4e-128 464.5 541 50.1
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.4e-128 464.5 582 44.8
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 8.8e-128 461.8 636 43.6
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 7.5e-127 458.8 662 43.2
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 2.2e-126 457.2 614 42.8
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.4e-125 453.8 624 42.1
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 5.9e-124 449.1 645 42.0
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 6.6e-123 445.7 621 41.9
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 8.6e-123 445.3 632 43.4
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 8.6e-123 445.3 575 44.9
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.1e-122 444.9 583 44.4
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 3.3e-122 443.4 627 42.6
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 1.2e-121 441.4 635 42.5
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 5.2e-120 436.0 603 43.6
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 8.9e-120 435.3 643 42.3
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 5.7e-119 432.6 629 42.1
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.3e-118 431.4 629 41.8
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 2.9e-118 430.3 595 40.5
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 4.9e-118 429.5 632 41.8
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 3.2e-117 426.8 621 40.9
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 1.6e-116 424.5 601 41.9
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 1.0e-115 421.8 613 41.4
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.0e-115 421.8 608 41.4
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 3.0e-115 420.2 489 46.4
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 5.0e-115 419.5 602 41.4
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 1.8e-112 411.0 646 41.6
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 1.3e-110 404.8 654 38.8
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 9.5e-106 388.7 611 39.6
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 2.1e-105 387.5 608 38.5
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 2.4e-101 374.0 602 38.7
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.3e-94 351.7 579 38.2
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 4.1e-93 346.7 382 49.0
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 7.8e-92 342.4 599 36.6
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.1e-91 339.7 576 38.0
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 8.6e-91 339.0 622 36.3
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.5e-90 338.2 447 42.5
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.6e-89 334.7 579 36.8
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 2.0e-87 327.8 633 35.9
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 4.9e-86 323.2 622 35.7
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.9e-82 311.2 545 37.4
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 4.0e-80 303.5 588 34.5
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 7.1e-77 292.7 629 33.7
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 2.1e-73 281.2 454 37.9
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 2.4e-72 277.7 559 33.8
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 3.1e-72 277.3 628 32.6
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.2e-68 265.4 556 35.3
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 2.1e-68 264.6 587 31.7
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 1.4e-64 251.9 511 32.9
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.2e-41 174.9 384 33.3
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.7e-36 157.9 383 31.6
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 3.0e-27 127.9 409 28.6
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 2.0e-23 115.2 276 26.8
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 5.9e-23 113.6 380 26.8
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 5.0e-22 110.5 246 37.0
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 8.5e-22 109.8 379 26.4
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 9.1e-16 89.7 118 39.0
Sabra05G0109200 Salix brachista HOM05D006144 ORTHO05D006357 5.9e-15 87.0 191 36.6
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 2.8e-12 78.2 80 43.8
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 1.5e-10 72.4 326 23.3
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 1.4e-08 65.9 232 30.2
TPR.G19009 Trifolium pratense HOM05D006144 ORTHO05D006357 1.8e-08 65.5 248 27.8
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.7e-07 61.6 115 26.1
Sc11g0005350 Simmondsia chinensis HOM05D006144 ORTHO05D006357 1.7e-06 58.9 96 32.3
GSVIVG01002722001 Vitis vinifera HOM05D006144 ORTHO05D006357 1.7e-06 58.9 101 39.6


User provided reference genes

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