Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc55.177 Carica papaya HOM05D007434 ORTHO05D009541 5.6e-51 204.1 115 100.0
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 4.6e-13 78.2 116 42.2
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 6.7e-12 74.3 117 41.9
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 8.8e-12 73.9 112 45.5
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 1.5e-11 73.2 107 43.0
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.0e-11 72.8 115 39.1
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 3.3e-11 72.0 117 44.4
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 4.3e-11 71.6 110 38.2
Gohir.D11G197400 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.7e-11 71.2 117 43.6
Gorai.007G211200 Gossypium raimondii HOM05D007434 ORTHO05D009541 7.4e-11 70.9 112 45.5
Lalb_Chr16g0378251 Lupinus albus HOM05D007434 ORTHO05D009541 1.3e-10 70.1 109 39.4
Lalb_Chr16g0378431 Lupinus albus HOM05D007434 ORTHO05D009541 1.3e-10 70.1 109 39.4
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 4.8e-10 68.2 112 44.6
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 5.3e-09 64.7 107 39.3
CsaV3_6G043140 Cucumis sativus L. HOM05D007434 ORTHO05D009541 6.9e-09 64.3 117 38.5
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 9.1e-09 63.9 107 39.3
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 2.0e-08 62.8 109 33.9
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 3.4e-08 62.0 116 39.7
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 7.7e-08 60.8 125 36.8
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.3e-07 60.1 117 39.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 1.7e-07 59.7 117 38.5
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 1.7e-07 59.7 114 37.7
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 2.9e-07 58.9 115 38.3
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 3.8e-07 58.5 107 35.5
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 5.0e-07 58.2 117 32.5
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 6.5e-07 57.8 106 40.6
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 6.5e-07 57.8 107 30.8
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 1.1e-06 57.0 100 38.0
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.1e-06 57.0 100 38.0
ClCG01G016720 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.4e-06 56.6 105 39.0
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 1.9e-06 56.2 106 40.6
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 2.5e-06 55.8 116 37.1
CARHR280850 Cardamine hirsuta HOM05D012520 ORTHO05D013638 5.5e-06 54.7 115 34.8
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 7.2e-06 54.3 107 35.5
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 7.2e-06 54.3 110 36.4


User provided reference genes

Program Settings