Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc543.5 Carica papaya HOM05D000957 ORTHO05D000754 5.5e-46 187.2 89 100.0
GSVIVG01028199001 Vitis vinifera HOM05D000957 ORTHO05D000754 1.4e-25 119.4 114 56.1
Thecc.01G321900 Theobroma cacao HOM05D000957 ORTHO05D000754 2.4e-25 118.6 114 53.5
Ciclev10024034m.g Citrus clementina HOM05D000957 ORTHO05D000754 5.3e-25 117.5 115 53.9
Atru.chr5.913 Acer truncatum HOM05D000957 ORTHO05D000754 7.0e-25 117.1 114 53.5
Gohir.A08G121000 Gossypium hirsutum HOM05D000957 ORTHO05D000754 2.0e-24 115.5 114 50.9
Manes.01G232800 Manihot esculenta HOM05D000957 ORTHO05D000754 2.0e-24 115.5 116 54.3
Duzib138G0103 Durio zibethinus HOM05D000957 ORTHO05D000754 2.7e-24 115.2 114 50.9
Gohir.D08G142300 Gossypium hirsutum HOM05D000957 ORTHO05D000754 4.5e-24 114.4 114 51.8
Gorai.004G146600 Gossypium raimondii HOM05D000957 ORTHO05D000754 5.9e-24 114.0 114 50.9
CANSAT25G2543 Cannabis sativa HOM05D000957 ORTHO05D000754 1.7e-23 112.5 117 49.6
TWI14G0783 Tripterygium wilfordii HOM05D000957 ORTHO05D000754 1.7e-23 112.5 114 54.4
COL.COLO4_23166 Corchorus olitorius HOM05D000957 ORTHO05D000754 2.2e-23 112.1 114 49.1
Gohir.A12G121700 Gossypium hirsutum HOM05D000957 ORTHO05D000754 3.8e-23 111.3 114 50.0
Gohir.D12G125300 Gossypium hirsutum HOM05D000957 ORTHO05D000754 3.8e-23 111.3 114 50.0
Gorai.008G136300 Gossypium raimondii HOM05D000957 ORTHO05D000754 3.8e-23 111.3 114 50.0
Potri.014G115200 Populus trichocarpa HOM05D000957 ORTHO05D000754 6.5e-23 110.5 117 52.1
Prupe.3G004800 Prunus persica HOM05D000957 ORTHO05D000754 1.1e-22 109.8 115 49.6
RcHm_v2.0_Chr3g0486611 Rosa chinensis HOM05D000957 ORTHO05D000754 1.1e-22 109.8 115 47.0
PGR044G0101 Punica granatum HOM05D000957 ORTHO05D000754 3.2e-22 108.2 107 49.5
Haze_05114 Corylus avellana HOM05D000957 ORTHO05D000754 5.5e-22 107.5 114 47.4
Eucgr.K03572 Eucalyptus grandis HOM05D000957 ORTHO05D000754 7.2e-22 107.1 115 49.6
Hma1.2p1_0484F.1_g162860 Hydrangea macrophylla HOM05D000957 ORTHO05D000754 7.2e-22 107.1 124 44.4
Potri.002G190200 Populus trichocarpa HOM05D000957 ORTHO05D000754 7.2e-22 107.1 115 49.6
arahy.Tifrunner.gnm1.ann1.HG0MI4 Arachis hypogaea HOM05D000957 ORTHO05D000754 9.4e-22 106.7 114 49.1
arahy.Tifrunner.gnm1.ann1.P82F2J Arachis hypogaea HOM05D000957 ORTHO05D000754 1.2e-21 106.3 114 49.1
QL12p034289 Quercus lobata HOM05D000957 ORTHO05D000754 2.1e-21 105.5 113 46.9
Sp4g29100 Schrenkiella parvula HOM05D000957 ORTHO05D000754 3.6e-21 104.8 105 49.5
TAR362G0193 Trochodendron aralioides HOM05D000957 ORTHO05D000754 4.7e-21 104.4 114 47.4
Thhalv10001786m.g Eutrema salsugineum HOM05D000957 ORTHO05D000754 6.1e-21 104.0 107 48.6
AL4G46660 Arabidopsis lyrata HOM05D000957 ORTHO05D000754 1.8e-20 102.4 104 51.9
FvH4_1g26530 Fragaria vesca HOM05D000957 ORTHO05D000754 4.0e-20 101.3 115 45.2
FAN19G0058 Fragaria x ananassa HOM05D000957 ORTHO05D000754 4.0e-20 101.3 115 45.2
A03p25840 Brassica napus HOM05D000957 ORTHO05D000754 6.8e-20 100.5 105 47.6
BolC3t15430H Brassica oleracea HOM05D000957 ORTHO05D000754 6.8e-20 100.5 105 47.6
BraA03t11798Z Brassica rapa HOM05D000957 ORTHO05D000754 6.8e-20 100.5 105 47.6
Dinv12101 Davidia involucrata HOM05D000957 ORTHO05D000754 6.8e-20 100.5 116 50.9
MD17G1280700 Malus domestica HOM05D000957 ORTHO05D000754 6.8e-20 100.5 115 44.3
FAN23G0101 Fragaria x ananassa HOM05D000957 ORTHO05D000754 8.8e-20 100.1 115 45.2
FAN26G0258 Fragaria x ananassa HOM05D000957 ORTHO05D000754 8.8e-20 100.1 115 45.2
FAN28G0289 Fragaria x ananassa HOM05D000957 ORTHO05D000754 8.8e-20 100.1 115 45.2
Sabra14G0085300 Salix brachista HOM05D000957 ORTHO05D000754 1.2e-19 99.8 117 48.7
CARHR142490 Cardamine hirsuta HOM05D000957 ORTHO05D000754 1.5e-19 99.4 104 47.1
Carub.0004s2985 Capsella rubella HOM05D000957 ORTHO05D000754 2.6e-19 98.6 104 47.1
AT2G47115 Arabidopsis thaliana HOM05D000957 ORTHO05D000754 4.4e-19 97.8 104 48.1
Sc05g0000160 Simmondsia chinensis HOM05D000957 ORTHO05D000754 4.4e-19 97.8 115 47.0
C03p30780 Brassica napus HOM05D000957 ORTHO05D000754 5.7e-19 97.4 105 46.7
Dinv33155 Davidia involucrata HOM05D000957 ORTHO05D000754 7.5e-19 97.1 117 47.9
CiPaw.08G084700 Carya illinoinensis HOM05D000957 ORTHO05D000754 9.8e-19 96.7 116 45.7
Nn3g21867 Nelumbo nucifera HOM05D000957 ORTHO05D000754 9.8e-19 96.7 116 44.8
CSS0011608 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 1.3e-18 96.3 126 42.1
CSS0013937 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 1.3e-18 96.3 126 42.1
MBI19_g32708_MAGBIO Magnolia biondii HOM05D000957 ORTHO05D000754 1.3e-18 96.3 114 47.4
Sabra02G0165400 Salix brachista HOM05D000957 ORTHO05D000754 1.3e-18 96.3 116 45.7
MD09G1288800 Malus domestica HOM05D000957 ORTHO05D000754 3.7e-18 94.7 115 44.3
Actinidia20969 Actinidia chinensis HOM05D000957 ORTHO05D000754 1.8e-17 92.4 117 46.2
Actinidia25869 Actinidia chinensis HOM05D000957 ORTHO05D000754 1.8e-17 92.4 117 44.4
Hma1.2p1_0408F.1_g146420 Hydrangea macrophylla HOM05D000957 ORTHO05D000754 1.8e-17 92.4 116 43.1
PGR083G0432 Punica granatum HOM05D000957 ORTHO05D000754 5.4e-17 90.9 114 43.9
TAR633G1262 Trochodendron aralioides HOM05D000957 ORTHO05D000754 9.1e-17 90.1 114 43.9
Glyma.19G219900 Glycine max HOM05D000957 ORTHO05D000754 1.2e-16 89.7 114 43.9
MBI03_g28535_MAGBIO Magnolia biondii HOM05D000957 ORTHO05D000754 1.6e-16 89.4 114 43.9
VMungo1383G0167 Vigna mungo HOM05D000957 ORTHO05D000754 2.0e-16 89.0 114 45.6
Aqoxy5G02751 Aquilegia oxysepala HOM05D000957 ORTHO05D000754 2.7e-16 88.6 110 40.0
Phvul.001G216300 Phaseolus vulgaris HOM05D000957 ORTHO05D000754 4.5e-16 87.8 114 45.6
EL10As5g23585 Beta vulgaris HOM05D000957 ORTHO05D000754 5.9e-16 87.4 111 41.4
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 5.9e-16 87.4 111 39.6
Phvul.007G211000 Phaseolus vulgaris HOM05D000957 ORTHO05D000754 1.0e-15 86.7 105 45.7
vmacro15095 Vaccinium macrocarpon HOM05D000957 ORTHO05D000754 2.9e-15 85.1 127 40.9
Medtr1g086330 Medicago truncatula HOM05D000957 ORTHO05D000754 5.0e-15 84.3 114 42.1
VMungo0720G1090 Vigna mungo HOM05D000957 ORTHO05D000754 5.0e-15 84.3 100 46.0
Glyma.10G009500 Glycine max HOM05D000957 ORTHO05D000754 6.6e-15 84.0 119 38.7
Eucgr.H00893 Eucalyptus grandis HOM05D000957 ORTHO05D000754 1.9e-14 82.4 116 39.7
Rhsim01G0293000 Rhododendron simsii HOM05D000957 ORTHO05D000754 3.3e-14 81.6 134 38.1
Lj5g0015031 Lotus japonicus HOM05D000957 ORTHO05D000754 5.5e-14 80.9 112 42.0
Ca_10251_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 7.2e-14 80.5 116 38.8
BcaB01g03182 Brassica carinata HOM05D000182 ORTHO05D000112 2.1e-13 79.0 91 44.0
PSO357G0506 Papaver somniferum HOM05D000957 ORTHO05D000754 3.6e-13 78.2 119 36.1
THA.LOC104802132 Tarenaya hassleriana HOM05D000957 ORTHO05D000754 4.7e-13 77.8 116 37.9
ATR0693G443 Amborella trichopoda HOM05D000957 ORTHO05D000754 8.0e-13 77.0 113 38.9
PSO170G1467 Papaver somniferum HOM05D000957 ORTHO05D000754 8.0e-13 77.0 120 36.7
SEGI_30146 Sequoiadendron giganteum HOM05D000957 ORTHO05D000754 5.2e-12 74.3 117 37.6
TPR.G3060 Trifolium pratense HOM05D000957 ORTHO05D000754 6.8e-12 73.9 113 38.9
AUR62011739 Chenopodium quinoa HOM05D000957 ORTHO05D000754 8.9e-12 73.6 102 38.2
AUR62024572 Chenopodium quinoa HOM05D000957 ORTHO05D000754 2.6e-11 72.0 107 37.4
BcaC01g05046 Brassica carinata HOM05D000957 ORTHO05D000754 9.8e-11 70.1 91 39.6
PSO357G0589 Papaver somniferum HOM05D000957 ORTHO05D000754 6.3e-10 67.4 119 33.6
PSO170G6064 Papaver somniferum HOM05D000957 ORTHO05D000754 1.4e-09 66.2 119 34.5
Psat6g159400 Pisum sativum HOM05D000957 ORTHO05D000754 1.8e-09 65.9 111 37.8
PSO170G3588 Papaver somniferum HOM05D000957 ORTHO05D000754 2.4e-09 65.5 119 33.6
PSO384G0982 Papaver somniferum HOM05D000957 ORTHO05D000754 2.4e-09 65.5 119 33.6
arahy.Tifrunner.gnm1.ann1.WZ2K1N Arachis hypogaea HOM05D000957 ORTHO05D000754 3.5e-08 61.6 139 28.1
PSO170G4430 Papaver somniferum HOM05D000957 ORTHO05D000754 1.0e-07 60.1 55 52.7
arahy.Tifrunner.gnm1.ann1.0X8JA4 Arachis hypogaea HOM05D000957 ORTHO05D000754 1.9e-06 55.8 139 27.3
Lj4g0023104 Lotus japonicus HOM05D000957 ORTHO05D000754 1.9e-06 55.8 96 30.2
CDE02G2234 Ceratophyllum demersum HOM05D000957 ORTHO05D000754 3.3e-06 55.1 43 51.2
CiPaw.07G122800 Carya illinoinensis HOM05D000957 ORTHO05D000754 9.5e-06 53.5 38 63.2


User provided reference genes

Program Settings