Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 3.3e-104 381.7 194 100.0
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 9.8e-48 194.1 193 56.5
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-45 187.2 191 55.5
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.0e-44 184.1 195 54.9
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.7e-44 183.3 181 58.0
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.0e-44 182.6 191 55.0
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 1.1e-43 180.6 183 57.4
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 4.3e-43 178.7 183 53.6
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.3e-43 177.9 183 53.0
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 1.0e-41 174.1 195 52.3
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 3.1e-41 172.6 192 53.6
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 4.0e-41 172.2 194 52.6
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 8.9e-41 171.0 181 56.4
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.2e-40 170.6 149 58.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 4.4e-40 168.7 153 57.5
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 5.8e-40 168.3 162 57.4
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 9.8e-40 167.5 145 63.4
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.3e-39 167.2 95 84.2
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.7e-39 166.8 102 77.5
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 2.9e-39 166.0 95 81.1
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 3.7e-39 165.6 157 58.0
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.7e-39 165.6 138 60.9
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 3.7e-39 165.6 185 54.1
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.9e-38 163.3 187 53.5
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.9e-38 163.3 94 84.0
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 2.4e-38 162.9 155 57.4
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.4e-38 162.9 103 75.7
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 3.2e-38 162.5 91 82.4
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 4.1e-38 162.2 99 80.8
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.1e-38 162.2 104 76.9
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 5.4e-38 161.8 136 62.5
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 9.2e-38 161.0 183 52.5
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 9.2e-38 161.0 157 56.7
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 9.2e-38 161.0 95 77.9
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 9.2e-38 161.0 139 61.9
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 1.2e-37 160.6 152 57.9
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.2e-37 160.6 186 52.7
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 1.2e-37 160.6 164 56.1
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.6e-37 160.2 90 83.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.6e-37 160.2 100 78.0
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 2.7e-37 159.5 201 48.3
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 3.5e-37 159.1 93 80.6
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 3.5e-37 159.1 188 51.6
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 7.8e-37 157.9 157 58.6
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 7.8e-37 157.9 156 57.7
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.3e-36 157.1 157 56.1
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.3e-36 157.1 168 53.6
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-36 157.1 103 74.8
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-36 157.1 168 53.6
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.3e-36 157.1 90 80.0
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.3e-36 157.1 90 80.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 3.0e-36 156.0 133 62.4
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 5.0e-36 155.2 126 66.7
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 6.6e-36 154.8 127 63.0
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 6.6e-36 154.8 101 73.3
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 6.6e-36 154.8 101 75.2
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 8.6e-36 154.5 97 77.3
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.5e-35 153.7 98 73.5
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.9e-35 153.3 98 72.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.5e-35 152.9 127 63.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 4.3e-35 152.1 128 61.7
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 4.3e-35 152.1 126 61.9
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 4.3e-35 152.1 89 78.7
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 7.3e-35 151.4 123 63.4
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 7.3e-35 151.4 97 75.3
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 1.2e-34 150.6 172 53.5
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.6e-34 150.2 134 61.2
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.6e-34 150.2 145 57.2
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.8e-34 149.4 153 56.2
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.8e-34 149.4 154 53.2
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 2.8e-34 149.4 176 51.7
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 3.6e-34 149.1 128 60.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 3.6e-34 149.1 128 60.2
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 6.2e-34 148.3 103 69.9
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.1e-33 147.5 104 68.3
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 1.4e-33 147.1 104 68.3
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.8e-33 146.7 89 77.5
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 2.3e-33 146.4 93 72.0
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 4.0e-33 145.6 93 77.4
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 6.8e-33 144.8 180 50.0
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 6.8e-33 144.8 89 76.4
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 8.9e-33 144.4 177 49.2
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 1.5e-32 143.7 93 74.2
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 2.0e-32 143.3 91 74.7
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 3.4e-32 142.5 98 67.3
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.4e-32 142.5 89 73.0
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 9.8e-32 141.0 86 75.6
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.7e-31 139.0 89 71.9
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 8.3e-31 137.9 80 80.0
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 1.9e-30 136.7 93 66.7
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 2.7e-29 132.9 90 68.9
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.5e-29 132.5 89 68.5
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 6.0e-29 131.7 71 85.9
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 6.0e-29 131.7 71 85.9
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.7e-28 130.2 91 68.1
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.5e-27 127.1 93 64.5
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 2.1e-26 123.2 69 79.7
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 4.7e-26 122.1 173 43.9
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.0e-25 119.0 71 77.5
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 2.0e-24 116.7 95 61.1
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 7.6e-24 114.8 81 65.4
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 9.9e-24 114.4 93 60.2
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.7e-23 113.6 99 58.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.9e-23 112.8 73 69.9
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.9e-22 110.2 102 56.9
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 2.1e-21 106.7 91 53.8
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.7e-20 103.6 106 54.7
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.9e-20 102.4 93 53.8
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 3.9e-20 102.4 87 56.3
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 3.3e-19 99.4 91 51.6
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.4e-17 93.2 77 54.5
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.2e-16 90.9 108 51.9
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.8e-10 68.9 91 38.5
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.4e-09 67.4 56 57.1
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 3.1e-09 66.2 40 75.0
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.2e-08 64.3 50 64.0
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.5e-08 62.4 43 72.1
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.5e-08 62.4 43 72.1


User provided reference genes

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