Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc54.65 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-63 245.0 119 100.0
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-34 148.7 94 74.5
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-31 138.7 84 78.6
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-22 109.4 90 62.2
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-22 108.6 126 46.0
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.7e-22 107.1 126 45.2
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-21 105.5 126 44.4
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-21 105.5 85 56.5
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-21 105.1 126 44.4
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-21 105.1 126 44.4
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-21 105.1 126 44.4
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-21 105.1 126 44.4
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-21 105.1 126 44.4
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-21 105.1 126 44.4
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-21 104.8 126 44.4
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.8e-21 104.8 126 44.4
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-21 104.4 126 43.7
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.2e-21 104.0 128 46.1
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-20 102.8 126 43.7
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-20 102.8 104 46.2
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-20 102.1 126 43.7
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-20 101.7 128 44.5
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 5.3e-20 101.3 132 46.2
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-19 100.1 124 45.2
Cpa.g.sc7.260 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-19 98.6 88 53.4
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-19 98.6 124 41.9
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 5.9e-19 97.8 85 50.6
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 5.9e-19 97.8 85 51.8
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 5.9e-19 97.8 130 44.6
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.7e-19 97.4 130 42.3
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-18 97.1 124 41.9
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-18 95.9 124 42.7
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-18 95.5 79 54.4
Cpa.g.sc41.68 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-18 95.5 90 48.9
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 2.9e-18 95.5 126 42.1
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-18 95.1 95 46.3
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-18 94.7 85 51.8
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-17 93.6 126 42.9
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 1.1e-17 93.6 83 54.2
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-17 93.6 128 41.4
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 1.1e-17 93.6 117 42.7
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-17 93.2 125 43.2
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-17 92.8 133 40.6
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.5e-17 92.4 123 45.5
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 7.2e-17 90.9 85 52.9
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 88 48.9
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 88 48.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 88 48.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 88 48.9
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 88 48.9
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.4e-17 90.5 87 48.3
Cpa.g.sc71.36 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-16 90.1 83 56.6
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-16 90.1 128 39.8
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-16 89.4 122 40.2
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-16 89.4 122 40.2
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-16 89.4 122 40.2
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-16 89.0 126 41.3
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-16 89.0 125 40.0
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-16 88.2 88 47.7
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.6e-16 88.2 126 42.1
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 6.1e-16 87.8 123 44.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-16 87.4 88 47.7
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.4e-15 86.7 123 42.3
Cpa.g.sc120.50 Carica papaya HOM05D006146 ORTHO05D007924 1.8e-15 86.3 112 44.6
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-15 86.3 111 42.3
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.7e-15 84.3 122 38.5
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.8e-15 84.0 88 45.5
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-14 83.6 123 39.8
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.5e-14 83.2 123 42.3
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-14 82.4 88 47.7
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.5e-14 82.4 123 42.3
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-14 82.0 108 40.7
Cpa.g.sc164.3 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-14 81.6 93 46.2
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-14 81.6 103 39.8
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 5.7e-14 81.3 90 46.7
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 9.7e-14 80.5 85 49.4
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-13 79.7 91 46.2
Cpa.g.sc10.11 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-13 79.3 72 55.6
Hma1.2p1_0020F.1_g014090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-13 79.0 81 45.7
Hma1.2p1_0077F.1_g039800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.8e-13 78.2 85 44.7
Cpa.g.sc10.112 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-13 77.8 69 56.5
Cpa.g.sc43.142 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-13 77.8 77 46.8
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-13 77.8 89 40.4
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-13 77.8 124 37.9
Ca_02873_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 8.2e-13 77.4 87 48.3
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-12 76.6 127 36.2
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 114 38.6
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 91 45.1
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-12 75.5 77 45.5
Hma1.2p1_0528F.1_g173080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-12 75.5 83 44.6
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-12 75.5 113 38.1
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-12 75.1 131 36.6
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-12 74.7 115 34.8
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-12 74.7 115 34.8
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-12 74.7 115 34.8
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-12 74.7 115 34.8
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 6.9e-12 74.3 127 33.9
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-12 74.3 89 39.3
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 9.1e-12 73.9 67 50.7
Cpa.g.sc150.60 Carica papaya HOM05D000002 ORTHO05D000047 9.1e-12 73.9 79 51.9
Cpa.g.sc332.6 Carica papaya HOM05D000002 ORTHO05D000047 9.1e-12 73.9 59 62.7
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.1e-12 73.9 89 42.7
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.1e-12 73.9 89 42.7
Hma1.2p1_1694F.1_g298020 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.1e-12 73.9 81 48.1
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-11 73.6 118 37.3
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-11 73.6 118 37.3
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-11 73.6 118 37.3
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.0e-11 72.8 101 42.6
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-11 72.8 86 44.2
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 5.9e-11 71.2 51 72.5
Cpa.g.sc301.5 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-10 68.9 61 57.4
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.8e-10 68.6 129 34.9
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-10 68.6 61 52.5
Cpa.g.sc43.36 Carica papaya HOM05D000246 ORTHO05D008363 3.8e-10 68.6 70 55.7
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-10 68.6 79 49.4
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-10 68.2 132 36.4
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 5.0e-10 68.2 108 36.1
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-10 67.8 68 48.5
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-10 67.8 48 70.8
Cpa.g.sc7.46 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-10 67.8 72 47.2
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-09 67.0 129 34.9
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 67.0 73 41.1
Cpa.g.sc474.2 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 67.0 61 54.1
Hma1.2p1_0062F.1_g034230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 67.0 123 34.1
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 67.0 136 34.6
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 67.0 136 34.6
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 67.0 136 34.6
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-09 66.2 91 38.5
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-09 65.9 129 34.1
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-09 65.9 129 34.1
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.2e-09 65.5 129 34.1
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.2e-09 65.1 94 36.2
Cpa.g.sc30.23 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-09 64.7 83 43.4
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.4e-09 63.9 94 36.2
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-08 63.5 47 55.3
Hma1.2p1_0734F.1_g210330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-08 63.2 134 34.3
Gorai.007G344200 Gossypium raimondii HOM05D000002 ORTHO05D000047 2.1e-08 62.8 82 39.0
Cpa.g.sc176.5 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-08 62.4 51 51.0
ClCG10G009560 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.7e-08 61.6 84 36.9
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 7.9e-08 60.8 50 60.0
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-07 60.5 103 35.9
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 60.1 34 55.9
Cpa.g.sc6.149 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 60.1 67 46.3
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-07 60.1 89 33.7
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-07 60.1 72 43.1
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-07 58.9 69 42.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.5 119 31.9
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 6.7e-07 57.8 128 28.1
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 6.7e-07 57.8 99 34.3
Cpa.g.sc54.36 Carica papaya HOM05D000002 ORTHO05D000047 8.8e-07 57.4 119 32.8
Ca_24124_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.1e-06 57.0 74 40.5
SHI07599 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-06 57.0 69 37.7
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 1.5e-06 56.6 90 36.7
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 55.8 48 58.3
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-06 55.5 54 50.0
TPR.G28095 Trifolium pratense HOM05D000002 ORTHO05D000001 3.3e-06 55.5 60 51.7
ClCG00G000760 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.4e-06 55.1 88 37.5
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 4.4e-06 55.1 88 30.7
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 4.4e-06 55.1 88 30.7
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 4.4e-06 55.1 120 34.2
Cpa.g.sc0.122 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-06 54.7 45 60.0
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 7.4e-06 54.3 46 60.9


User provided reference genes

Program Settings