Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc54.31 Carica papaya HOM05D000059 ORTHO05D009759 3.1e-37 157.9 78 100.0
Cpa.g.sc54.33 Carica papaya HOM05D000059 ORTHO05D034084 3.1e-37 157.9 78 100.0
GSVIVG01027353001 Vitis vinifera HOM05D000059 ORTHO05D009759 3.5e-36 154.5 77 97.4
Glyma.08G227200 Glycine max HOM05D000059 ORTHO05D009759 1.3e-35 152.5 77 96.1
Glyma.15G222300 Glycine max HOM05D000059 ORTHO05D009759 1.3e-35 152.5 77 96.1
CAN.G134.45 Capsicum annuum HOM05D000059 ORTHO05D009759 2.9e-35 151.4 77 94.8
Ca_24119_v3 Cicer arietinum L. HOM05D000059 ORTHO05D009759 2.9e-35 151.4 78 96.2
Cc08_g09570 Coffea canephora HOM05D000059 ORTHO05D009759 2.9e-35 151.4 77 94.8
Sed0015296 Sechium edule HOM05D000059 ORTHO05D009759 2.9e-35 151.4 76 97.4
PGSC0003DMG400027527 Solanum tuberosum HOM05D000059 ORTHO05D009759 2.9e-35 151.4 77 94.8
FvH4_5g27182 Fragaria vesca HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 94.8
FAN08G3269 Fragaria x ananassa HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 94.8
FAN18G2260 Fragaria x ananassa HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 94.8
MBI19_g28108_MAGBIO Magnolia biondii HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 94.8
Nitab4.5_0002687g0090 Nicotiana tabacum HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 93.5
Peaxi162Scf00647g00529 Petunia axillaris HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 93.5
RcHm_v2.0_Chr7g0218291 Rosa chinensis HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 94.8
TAR633G1052 Trochodendron aralioides HOM05D000059 ORTHO05D009759 6.5e-35 150.2 77 93.5
arahy.Tifrunner.gnm1.ann1.DT2ZPD Arachis hypogaea HOM05D000059 ORTHO05D009759 8.5e-35 149.8 77 94.8
arahy.Tifrunner.gnm1.ann1.R5AJY0 Arachis hypogaea HOM05D000059 ORTHO05D009759 8.5e-35 149.8 77 94.8
PGR142G1020 Punica granatum HOM05D000059 ORTHO05D009759 8.5e-35 149.8 77 93.5
CsaV3_6G004640 Cucumis sativus L. HOM05D000059 ORTHO05D009759 1.1e-34 149.4 76 96.1
Eucgr.G02633 Eucalyptus grandis HOM05D000059 ORTHO05D009759 1.1e-34 149.4 77 94.8
Ciclev10000859m.g Citrus clementina HOM05D000059 ORTHO05D009759 2.5e-34 148.3 76 94.7
Dinv02047 Davidia involucrata HOM05D000059 ORTHO05D009759 2.5e-34 148.3 76 94.7
MD07G1053900 Malus domestica HOM05D000059 ORTHO05D009759 2.5e-34 148.3 77 93.5
CiPaw.13G047900 Carya illinoinensis HOM05D000059 ORTHO05D009759 3.2e-34 147.9 77 93.5
Medtr8g043970 Medicago truncatula HOM05D000059 ORTHO05D009759 4.2e-34 147.5 78 92.3
VMungo1127G1077 Vigna mungo HOM05D000059 ORTHO05D009759 4.2e-34 147.5 77 92.2
Duzib114G0502 Durio zibethinus HOM05D000059 ORTHO05D009759 5.5e-34 147.1 76 94.7
Nitab4.5_0006602g0020 Nicotiana tabacum HOM05D000059 ORTHO05D009759 5.5e-34 147.1 77 90.9
Sopen01g040520 Solanum pennellii HOM05D000059 ORTHO05D009759 5.5e-34 147.1 77 92.2
TPR.G25025 Trifolium pratense HOM05D000059 ORTHO05D009759 5.5e-34 147.1 78 92.3
CANSAT11G0801 Cannabis sativa HOM05D000059 ORTHO05D009759 7.2e-34 146.7 77 90.9
Hma1.2p1_0233F.1_g098010 Hydrangea macrophylla HOM05D000059 ORTHO05D009759 7.2e-34 146.7 77 90.9
PSO339G3396 Papaver somniferum HOM05D000059 ORTHO05D009759 7.2e-34 146.7 77 92.2
Solyc01g096820.4 Solanum lycopersicum HOM05D000059 ORTHO05D009759 7.2e-34 146.7 77 92.2
Phvul.011G186900 Phaseolus vulgaris HOM05D000059 ORTHO05D009759 9.4e-34 146.4 77 90.9
Manes.10G063500 Manihot esculenta HOM05D000059 ORTHO05D009759 1.2e-33 146.0 76 92.1
Thecc.10G130400 Theobroma cacao HOM05D000059 ORTHO05D009759 1.2e-33 146.0 76 93.4
Haze_03394 Corylus avellana HOM05D000059 ORTHO05D009759 1.6e-33 145.6 77 92.2
Oeu013046.1 Olea europaea HOM05D000059 ORTHO05D009759 1.6e-33 145.6 77 92.2
Gorai.N006600 Gossypium raimondii HOM05D000059 ORTHO05D009759 2.1e-33 145.2 76 93.4
TWI38G0951 Tripterygium wilfordii HOM05D000059 ORTHO05D009759 2.1e-33 145.2 76 93.4
COL.COLO4_07153 Corchorus olitorius HOM05D000059 ORTHO05D009759 2.7e-33 144.8 76 93.4
Actinidia12137 Actinidia chinensis HOM05D000059 ORTHO05D009759 4.7e-33 144.1 77 90.9
Lj3g0014051 Lotus japonicus HOM05D000059 ORTHO05D009759 4.7e-33 144.1 77 89.6
Potri.010G247400 Populus trichocarpa HOM05D000059 ORTHO05D009759 4.7e-33 144.1 76 92.1
Rhsim07G0072600 Rhododendron simsii HOM05D000059 ORTHO05D009759 4.7e-33 144.1 77 90.9
Sabra10G0192800 Salix brachista HOM05D000059 ORTHO05D009759 4.7e-33 144.1 76 92.1
vmacro13792 Vaccinium macrocarpon HOM05D000059 ORTHO05D009759 4.7e-33 144.1 77 90.9
Haze_03390 Corylus avellana HOM05D000059 ORTHO05D009759 6.1e-33 143.7 77 90.9
PSO384G3320 Papaver somniferum HOM05D000059 ORTHO05D009759 8.0e-33 143.3 77 89.6
ECA232G4524 Erigeron canadensis HOM05D002501 ORTHO05D009759 1.0e-32 142.9 77 88.3
Lalb_Chr19g0132601 Lupinus albus HOM05D000059 ORTHO05D009759 1.8e-32 142.1 77 90.9
Atru.chr12.1136 Acer truncatum HOM05D000059 ORTHO05D009759 2.3e-32 141.7 76 90.8
SalBow6G6738 Salvia bowleyana HOM05D000059 ORTHO05D009759 2.3e-32 141.7 77 88.3
MELO3C030256.2 Cucumis melo HOM05D000059 ORTHO05D034084 3.0e-32 141.4 84 85.7
DCAR_023134 Daucus carota HOM05D000059 ORTHO05D009759 3.0e-32 141.4 77 87.0
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 3.0e-32 141.4 77 88.3
HPP92_017887 Vanilla planifolia HOM05D000059 ORTHO05D009759 3.0e-32 141.4 77 87.0
Migut.N01872 Erythranthe guttata HOM05D000059 ORTHO05D009759 6.8e-32 140.2 77 87.0
Cfa010436 Carpinus fangiana HOM05D000059 ORTHO05D009759 8.8e-32 139.8 77 88.3
Lsat_1_v5_gn_8_117641 Lactuca sativa HOM05D000059 ORTHO05D009759 1.5e-31 139.0 76 89.5
DCAR_011576 Daucus carota HOM05D000059 ORTHO05D009759 2.6e-31 138.3 77 85.7
Psat4g141880 Pisum sativum HOM05D000059 ORTHO05D009759 9.8e-31 136.3 69 95.7
Aqoxy1G04298 Aquilegia oxysepala HOM05D000059 ORTHO05D009759 1.3e-30 136.0 77 85.7
HanXRQChr09g0258271 Helianthus annuus HOM05D000059 ORTHO05D009759 2.2e-30 135.2 77 84.4
Os05g0489900 Oryza sativa ssp. japonica HOM05D000059 ORTHO05D009759 2.2e-30 135.2 77 81.8
Nn7g37296 Nelumbo nucifera HOM05D000059 ORTHO05D009759 9.1e-29 129.8 77 77.9
ATR0307G069 Amborella trichopoda HOM05D000059 ORTHO05D009759 8.5e-27 123.2 77 71.4
SEGI_19769 Sequoiadendron giganteum HOM05D000059 ORTHO05D009759 4.0e-24 114.4 76 69.7
ClCG08G008620 Citrullus lanatus HOM05D000059 ORTHO05D009759 5.2e-24 114.0 92 67.4
SMO353G0224 Selaginella moellendorffii HOM05D000059 ORTHO05D009759 3.4e-23 111.3 76 69.7
CSS0013163 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 1.4e-21 105.9 59 86.4
CSS0038335 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 1.4e-21 105.9 59 86.4
Potri.008G011541 Populus trichocarpa HOM05D000059 ORTHO05D009759 1.2e-20 102.8 92 59.8
Zm00001eb306730 Zea mays HOM05D000059 ORTHO05D009759 1.9e-18 95.5 52 82.7
MD02G1266000 Malus domestica HOM05D000059 ORTHO05D034084 2.9e-14 81.6 45 84.4
Pp3c21_15330 Physcomitrium patens HOM05D000059 ORTHO05D009759 4.3e-10 67.8 76 44.7
Zm00001eb255740 Zea mays HOM05D000059 ORTHO05D009759 7.3e-10 67.0 77 49.4
Zm00001eb339780 Zea mays HOM05D000059 ORTHO05D009759 1.8e-08 62.4 77 46.8
HPP92_017883 Vanilla planifolia HOM05D000059 ORTHO05D009759 2.0e-07 58.9 34 79.4


User provided reference genes

Program Settings