Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 3.0e-257 891.3 455 100.0
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 1.7e-204 716.1 453 80.8
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 7.3e-203 710.7 450 81.8
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.6e-202 708.4 451 81.8
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 8.1e-202 707.2 453 80.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 5.2e-201 704.5 449 80.4
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 5.8e-200 701.0 455 79.1
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 5.8e-200 701.0 455 79.3
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 5.8e-200 701.0 455 79.1
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 9.9e-200 700.3 451 80.0
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 1.3e-199 699.9 455 78.7
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 1.3e-199 699.9 455 78.9
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.3e-199 699.9 455 79.1
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 1.7e-199 699.5 452 79.4
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 2.9e-199 698.7 454 79.3
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 3.8e-199 698.4 455 79.3
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 3.8e-199 698.4 455 79.3
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 8.4e-199 697.2 455 78.9
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 1.1e-198 696.8 455 78.9
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.4e-198 696.4 455 78.9
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 2.4e-198 695.7 442 81.2
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 2.4e-198 695.7 442 81.2
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 3.2e-198 695.3 455 78.9
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 7.1e-198 694.1 454 78.6
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 1.2e-197 693.3 448 80.4
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.1e-197 692.6 455 78.5
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 4.6e-197 691.4 442 79.4
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 4.6e-197 691.4 451 78.9
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 6.0e-197 691.0 455 78.5
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.0e-196 690.3 454 77.8
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 8.6e-196 687.2 455 78.5
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 8.6e-196 687.2 449 79.7
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.5e-195 685.6 438 80.1
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 5.6e-195 684.5 448 78.1
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 3.6e-194 681.8 448 80.1
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.7e-194 681.4 452 77.9
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 1.1e-193 680.2 450 77.8
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.4e-193 679.9 448 77.9
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.8e-193 679.5 452 77.9
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 3.1e-193 678.7 444 78.4
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 3.1e-193 678.7 388 87.1
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 5.2e-193 677.9 456 77.2
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 6.9e-193 677.6 376 88.0
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.5e-192 676.4 453 77.0
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 1.5e-192 676.4 453 77.0
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.0e-192 676.0 444 79.1
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.4e-192 675.2 453 76.6
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.8e-192 674.5 441 78.0
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 1.3e-191 673.3 459 76.9
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 1.7e-191 672.9 387 85.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 2.2e-191 672.5 451 78.5
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 2.9e-191 672.2 448 77.2
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 3.8e-191 671.8 448 76.6
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 3.8e-191 671.8 441 77.8
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.9e-191 671.4 452 76.1
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 4.9e-191 671.4 449 78.0
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 4.9e-191 671.4 452 76.1
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 6.4e-191 671.0 468 74.8
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 6.4e-191 671.0 376 87.2
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.4e-191 671.0 447 77.6
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.4e-191 671.0 455 77.1
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.4e-190 669.8 382 86.4
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 3.2e-190 668.7 452 75.9
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 3.2e-190 668.7 448 76.6
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.2e-190 668.7 441 77.3
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 4.2e-190 668.3 453 75.9
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 4.2e-190 668.3 453 75.9
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 4.2e-190 668.3 443 77.7
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 5.4e-190 667.9 448 76.6
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.4e-190 667.9 441 77.3
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 1.2e-189 666.8 449 76.4
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 1.6e-189 666.4 376 86.7
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 3.5e-189 665.2 448 76.3
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 3.5e-189 665.2 454 76.7
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 6.0e-189 664.5 441 76.9
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 6.0e-189 664.5 441 78.9
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 1.0e-188 663.7 439 76.5
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 2.3e-188 662.5 390 83.3
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 3.0e-188 662.1 441 76.6
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 3.9e-188 661.8 387 85.8
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 5.1e-188 661.4 446 76.7
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 5.1e-188 661.4 382 84.6
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 5.1e-188 661.4 442 76.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 6.6e-188 661.0 451 76.3
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 8.7e-188 660.6 450 77.6
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.1e-187 660.2 442 77.6
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 1.5e-187 659.8 381 85.6
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.5e-187 659.8 442 77.6
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 4.3e-187 658.3 453 75.3
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 4.3e-187 658.3 448 76.1
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 4.3e-187 658.3 450 76.9
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 5.6e-187 657.9 447 76.1
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 7.3e-187 657.5 455 74.1
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 7.3e-187 657.5 450 75.8
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 7.3e-187 657.5 442 77.1
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.3e-186 656.8 442 75.6
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 1.6e-186 656.4 442 78.3
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 2.1e-186 656.0 449 75.9
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 6.2e-186 654.4 452 74.3
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 8.1e-186 654.1 443 77.2
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.4e-185 653.3 458 75.1
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.1e-185 652.1 444 75.7
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 4.0e-185 651.7 444 75.5
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.2e-184 650.2 496 70.4
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 4.5e-184 648.3 449 74.4
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.6e-184 647.5 480 71.2
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 9.9e-184 647.1 444 75.5
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 3.8e-183 645.2 448 74.1
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.9e-183 644.8 443 75.2
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 1.4e-182 643.3 445 75.7
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 9.3e-182 640.6 470 72.1
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.5e-181 638.6 441 75.3
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 6.0e-181 637.9 443 75.2
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.5e-179 633.3 442 75.8
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 2.1e-178 629.4 444 73.9
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.8e-177 626.3 572 61.4
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 2.4e-177 625.9 525 65.3
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.5e-176 623.2 444 72.3
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 4.5e-176 621.7 382 80.6
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.7e-175 619.8 384 81.5
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 1.7e-175 619.8 448 73.0
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 6.4e-175 617.8 373 81.5
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.7e-173 612.5 452 71.2
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.0e-172 609.0 432 73.4
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 6.7e-172 607.8 374 80.2
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 5.6e-171 604.7 424 73.8
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 7.4e-171 604.4 376 79.0
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 1.4e-169 600.1 382 76.4
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 4.0e-169 598.6 376 76.3
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 5.3e-169 598.2 376 80.1
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 6.9e-169 597.8 389 76.9
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 6.5e-167 591.3 339 85.3
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 3.2e-166 589.0 376 76.6
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.6e-162 576.6 343 84.8
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 5.5e-158 561.6 354 81.6
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 1.0e-156 557.4 377 75.6
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 6.7e-156 554.7 338 82.5
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 7.4e-155 551.2 377 76.1
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 3.8e-151 538.9 342 80.7
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 2.3e-148 529.6 339 74.3
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 2.0e-144 516.5 448 63.6
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 4.5e-144 515.4 368 70.4
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 4.5e-144 515.4 366 70.8
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 8.5e-143 511.1 374 70.1
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 3.2e-142 509.2 311 78.1
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 2.1e-141 506.5 370 70.8
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 3.9e-140 502.3 346 73.7
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 9.7e-131 471.1 258 87.6
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 5.0e-119 432.2 269 82.2
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 1.5e-118 430.6 311 67.8
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 2.1e-117 426.8 263 79.8
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.0e-112 410.2 372 58.3
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 1.6e-104 384.0 237 83.5
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.1e-89 334.7 257 68.5
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 3.6e-85 319.7 190 86.3
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 5.8e-83 312.4 247 66.8
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.7e-82 310.8 183 84.7
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 6.0e-80 302.4 365 45.5
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 1.7e-79 300.8 353 49.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.8e-68 264.2 181 71.8
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 5.1e-63 246.1 221 64.3
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 2.1e-61 240.7 146 81.5
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.1e-61 238.8 244 59.4
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 6.9e-60 235.7 179 66.5
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 6.9e-60 235.7 179 66.5
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 6.5e-42 176.0 99 85.9
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.4e-35 153.7 172 50.6
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.5e-30 138.3 220 45.0
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.0e-28 129.4 312 36.9
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 1.5e-27 128.3 82 78.0
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 1.5e-22 111.7 60 93.3
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 5.7e-22 109.8 82 68.3
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.2e-19 102.1 63 82.5
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.2e-19 102.1 63 82.5
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.5e-17 95.1 90 53.3
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 2.7e-16 90.9 75 62.7
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 1.5e-14 85.1 45 88.9
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.7e-13 81.6 46 78.3
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 4.8e-13 80.1 47 85.1
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 1.6e-11 75.1 74 54.1
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 4.5e-11 73.6 74 55.4
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 3.8e-10 70.5 74 54.1
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 8.5e-10 69.3 43 76.7
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 1.6e-08 65.1 42 78.6
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 2.3e-07 61.2 43 62.8
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 7.5e-06 56.2 28 78.6


User provided reference genes

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