Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 2.3e-111 405.6 210 100.0
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 3.9e-66 255.4 190 65.8
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 8.6e-66 254.2 191 68.6
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 3.3e-65 252.3 191 66.5
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 3.3e-65 252.3 190 65.3
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 9.6e-65 250.8 185 68.6
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 8.1e-64 247.7 191 66.0
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.8e-63 246.5 181 69.1
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 2.0e-62 243.0 188 64.9
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.4e-62 241.9 191 63.4
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 9.9e-62 240.7 202 61.4
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 9.9e-62 240.7 192 62.5
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 2.9e-61 239.2 189 63.5
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.9e-61 239.2 185 65.4
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 6.4e-61 238.0 186 66.1
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 8.4e-61 237.7 184 66.3
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 1.1e-60 237.3 199 60.8
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 1.1e-60 237.3 201 63.2
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.4e-60 236.1 190 63.7
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.2e-60 235.7 183 63.9
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 3.2e-60 235.7 187 64.2
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 5.4e-60 235.0 186 65.6
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 7.1e-60 234.6 187 64.2
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 9.3e-60 234.2 204 59.3
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 3.5e-59 232.3 206 57.8
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.5e-59 232.3 184 63.0
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 7.8e-59 231.1 184 63.0
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.0e-58 230.7 206 56.8
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.9e-58 228.8 181 61.3
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 8.7e-58 227.6 187 61.5
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 1.5e-57 226.9 186 63.4
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.9e-57 226.5 184 62.0
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.9e-57 226.5 188 57.4
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 2.5e-57 226.1 195 61.5
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 4.3e-57 225.3 179 67.0
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 9.6e-57 224.2 185 61.1
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 9.6e-57 224.2 185 59.5
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.3e-56 223.8 182 58.8
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.3e-56 223.8 184 61.4
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.3e-56 223.8 187 62.0
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.6e-56 223.4 187 62.0
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 3.6e-56 222.2 188 61.2
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 3.6e-56 222.2 191 58.6
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 3.6e-56 222.2 191 58.6
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 6.2e-56 221.5 188 61.7
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.8e-55 219.9 166 64.5
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 2.4e-55 219.5 188 59.6
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 2.4e-55 219.5 191 58.1
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 3.1e-55 219.2 188 61.7
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 3.1e-55 219.2 187 59.9
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 4.0e-55 218.8 183 61.7
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 5.3e-55 218.4 189 57.7
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 9.0e-55 217.6 186 58.6
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 4.4e-54 215.3 182 62.6
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 5.8e-54 214.9 181 63.0
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 9.9e-54 214.2 192 60.9
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.7e-53 213.4 186 56.5
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.7e-53 213.4 190 58.4
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.2e-53 213.0 184 59.2
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.4e-52 210.3 181 60.2
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 3.2e-52 209.1 186 58.6
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 6.6e-50 201.4 184 59.2
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 8.7e-50 201.1 194 54.1
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 9.6e-49 197.6 185 49.2
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 3.6e-48 195.7 188 53.2
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 4.8e-48 195.3 189 52.9
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.2e-48 194.9 177 57.6
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.8e-47 193.4 202 51.0
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 2.4e-47 193.0 189 52.9
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 6.9e-47 191.4 186 52.2
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.6e-46 189.5 186 53.8
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 6.7e-42 174.9 180 48.9
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.5e-41 173.7 182 48.4
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 9.3e-36 154.5 196 43.4
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.5e-33 146.4 180 47.2
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.6e-32 143.7 188 43.6
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.6e-32 143.7 261 32.2
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.4e-31 139.8 274 30.7
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-30 137.1 177 45.8
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-29 133.7 170 48.8
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.5e-28 129.8 176 43.2
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.5e-27 125.9 172 41.9
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 6.7e-26 121.7 220 35.5
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-25 120.6 193 40.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 2.5e-25 119.8 190 40.5
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-23 114.4 194 38.7
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.4e-23 114.0 186 38.7
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.8e-23 113.6 88 60.2
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-23 113.6 117 53.8
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-22 110.2 182 38.5
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.9e-21 106.3 174 35.6
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.9e-20 103.6 179 34.6
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 2.7e-19 99.8 98 56.1
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 7.9e-19 98.2 166 33.7
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.7e-18 95.1 110 50.0
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 1.1e-17 94.4 87 59.8
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 2.9e-13 79.7 121 38.8
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.2e-12 75.9 149 36.2
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.9e-11 71.6 91 44.0
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 1.0e-10 71.2 112 40.2
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-10 70.5 163 31.9
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 8.8e-10 68.2 114 36.0
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 1.3e-08 64.3 114 39.5
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 1.7e-08 63.9 112 38.4


User provided reference genes

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