Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 3.5e-49 198.0 99 100.0
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 2.6e-28 128.6 76 82.9
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.3e-27 126.3 76 80.3
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 2.9e-27 125.2 76 77.6
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 2.4e-26 122.1 76 77.6
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 3.2e-26 121.7 78 75.6
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 3.2e-26 121.7 78 73.1
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 4.1e-26 121.3 76 77.6
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 4.1e-26 121.3 76 77.6
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 7.0e-26 120.6 78 74.4
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 2.0e-25 119.0 76 75.0
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.7e-25 118.6 76 69.7
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 2.7e-25 118.6 76 72.4
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 2.7e-25 118.6 76 75.0
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 2.7e-25 118.6 76 75.0
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 2.7e-25 118.6 76 69.7
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 4.6e-25 117.9 76 72.4
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 7.8e-25 117.1 76 69.7
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 1.7e-24 115.9 76 72.4
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.3e-24 115.5 76 69.7
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.0e-24 115.2 76 69.7
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.0e-24 115.2 76 71.1
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 3.9e-24 114.8 76 69.7
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 3.9e-24 114.8 76 68.4
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.9e-24 114.8 76 68.4
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 3.9e-24 114.8 76 72.4
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 5.0e-24 114.4 76 72.4
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 5.0e-24 114.4 78 69.2
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 5.0e-24 114.4 76 69.7
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 6.6e-24 114.0 78 67.9
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 6.6e-24 114.0 75 69.3
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.1e-23 113.2 76 73.7
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 3.3e-23 111.7 76 69.7
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 5.6e-23 110.9 76 68.4
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 7.3e-23 110.5 76 68.4
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.2e-22 109.8 76 67.1
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 1.6e-22 109.4 76 67.1
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 2.1e-22 109.0 76 68.4
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.1e-22 109.0 76 68.4
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 3.6e-22 108.2 76 64.5
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 3.6e-22 108.2 104 55.8
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 4.7e-22 107.8 76 64.5
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 4.7e-22 107.8 78 65.4
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 8.0e-22 107.1 76 65.8
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 1.4e-21 106.3 78 65.4
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 1.4e-21 106.3 76 67.1
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 3.1e-21 105.1 77 67.5
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 3.1e-21 105.1 76 64.5
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.1e-21 105.1 78 64.1
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 4.0e-21 104.8 76 65.8
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 6.8e-21 104.0 76 64.5
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 6.8e-21 104.0 76 63.2
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 6.8e-21 104.0 78 65.4
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.2e-20 103.2 78 64.1
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 1.5e-20 102.8 76 61.8
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 2.0e-20 102.4 76 64.5
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 2.6e-20 102.1 77 66.2
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 2.6e-20 102.1 77 66.2
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 4.4e-20 101.3 76 61.8
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 4.4e-20 101.3 78 64.1
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.8e-20 100.1 67 65.7
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 9.8e-20 100.1 81 58.0
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 9.8e-20 100.1 73 65.8
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.7e-19 99.4 74 62.2
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 2.2e-19 99.0 78 62.8
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 2.2e-19 99.0 78 60.3
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 2.9e-19 98.6 78 61.5
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 4.9e-19 97.8 59 78.0
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 6.4e-19 97.4 76 60.5
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 8.3e-19 97.1 78 57.7
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 1.1e-18 96.7 76 63.2
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.1e-18 96.7 76 63.2
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 1.1e-18 96.7 78 57.7
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.9e-18 95.9 80 62.5
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 1.9e-18 95.9 80 62.5
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.9e-18 95.9 80 62.5
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 1.9e-18 95.9 80 57.5
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 3.2e-18 95.1 59 76.3
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 3.2e-18 95.1 76 59.2
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 4.1e-18 94.7 74 62.2
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 5.4e-18 94.4 76 60.5
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 5.4e-18 94.4 77 63.6
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 7.0e-18 94.0 60 70.0
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 1.6e-17 92.8 76 55.3
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 2.0e-17 92.4 76 56.6
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 2.7e-17 92.0 76 59.2
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 2.7e-17 92.0 60 73.3
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 6.0e-17 90.9 78 53.8
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 1.7e-16 89.4 74 56.8
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 2.3e-16 89.0 73 60.3
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 2.3e-16 89.0 80 60.0
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 2.3e-16 89.0 78 59.0
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 3.9e-16 88.2 88 54.5
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 6.6e-16 87.4 76 52.6
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 1.6e-14 82.8 59 67.8
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 2.8e-14 82.0 76 51.3
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 2.8e-14 82.0 76 51.3
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 1.8e-13 79.3 76 48.7
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 1.1e-10 70.1 77 48.1
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 4.1e-10 68.2 76 48.7
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 7.1e-10 67.4 74 50.0
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 6.0e-09 64.3 76 44.7
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 6.0e-09 64.3 41 65.9
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.3e-08 62.4 74 41.9
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 3.6e-06 55.1 81 39.5


User provided reference genes

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