Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 2.1e-77 292.4 153 100.0
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 1.6e-37 159.8 145 60.0
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 6.8e-36 154.5 145 58.6
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 2.6e-35 152.5 144 57.6
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 8.3e-34 147.5 145 57.9
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 3.2e-33 145.6 145 57.2
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 4.6e-32 141.7 145 56.6
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 5.9e-32 141.4 145 53.1
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.0e-31 140.6 148 55.4
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 1.7e-31 139.8 142 53.5
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.7e-31 139.8 145 55.9
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 1.5e-30 136.7 144 54.2
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 4.3e-30 135.2 144 51.4
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 9.5e-30 134.0 144 51.4
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 1.6e-29 133.3 146 49.3
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 4.7e-29 131.7 144 50.0
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 5.2e-28 128.3 146 49.3
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 8.9e-28 127.5 145 49.0
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.2e-27 127.1 142 52.8
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.6e-27 125.9 136 55.1
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 4.4e-27 125.2 131 55.7
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 2.2e-26 122.9 145 47.6
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.2e-26 122.9 145 51.0
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.9e-26 121.7 145 50.3
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.2e-25 119.0 145 46.9
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 4.1e-25 118.6 136 50.7
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.1e-25 118.6 145 46.2
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.0e-24 116.3 145 46.2
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 3.5e-24 115.5 150 46.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.0e-23 114.0 141 48.2
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 1.0e-23 114.0 156 45.5
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 2.3e-23 112.8 147 50.3
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 2.3e-23 112.8 145 45.5
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 3.9e-23 112.1 155 51.0
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 2.5e-22 109.4 139 48.2
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 2.5e-22 109.4 131 49.6
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 3.3e-22 109.0 145 47.6
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 9.5e-22 107.5 133 49.6
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 9.5e-22 107.5 133 47.4
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 1.2e-21 107.1 145 46.2
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.2e-21 107.1 131 47.3
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.1e-21 106.3 130 46.9
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.6e-21 105.5 130 46.9
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 4.7e-21 105.1 155 43.2
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 4.7e-21 105.1 122 48.4
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 1.1e-20 104.0 141 46.8
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 1.4e-20 103.6 126 47.6
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 2.3e-20 102.8 145 44.8
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 2.3e-20 102.8 89 61.8
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 3.1e-20 102.4 130 47.7
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 4.0e-20 102.1 155 45.2
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 4.0e-20 102.1 130 46.2
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 5.2e-20 101.7 130 45.4
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 6.8e-20 101.3 144 47.2
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 8.9e-20 100.9 134 48.5
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 1.2e-19 100.5 156 43.6
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.5e-19 100.1 144 47.2
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 5.8e-19 98.2 154 46.1
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.3e-18 97.1 131 40.5
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.3e-18 97.1 142 42.3
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 1.7e-18 96.7 144 46.5
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 2.9e-18 95.9 133 44.4
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.4e-17 93.6 136 39.7
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 1.9e-17 93.2 131 38.2
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 2.4e-17 92.8 138 42.0
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 2.4e-17 92.8 145 43.4
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 5.4e-17 91.7 133 43.6
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 5.4e-17 91.7 130 43.8
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 5.4e-17 91.7 137 36.5
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 7.1e-17 91.3 131 37.4
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 9.2e-17 90.9 131 38.9
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 4.6e-16 88.6 109 49.5
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 6.0e-16 88.2 138 44.9
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 1.0e-15 87.4 145 40.7
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 1.3e-15 87.0 145 41.4
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 3.9e-15 85.5 127 44.1
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 5.1e-15 85.1 140 41.4
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 6.6e-15 84.7 134 43.3
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 6.6e-15 84.7 142 42.3
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 6.6e-15 84.7 122 40.2
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 6.6e-15 84.7 130 42.3
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.1e-14 84.0 129 41.9
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 2.5e-14 82.8 141 37.6
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 3.3e-14 82.4 131 39.7
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 4.3e-14 82.0 134 42.5
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 1.6e-13 80.1 151 36.4
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 8.1e-13 77.8 147 33.3
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 8.1e-13 77.8 142 37.3
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.1e-12 77.4 126 40.5
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 1.4e-12 77.0 142 38.0
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.4e-12 77.0 150 37.3
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.4e-12 77.0 130 43.1
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 8.9e-12 74.3 150 35.3
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.2e-11 73.9 141 36.9
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 2.6e-11 72.8 136 34.6
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 5.8e-11 71.6 131 39.7
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 9.9e-11 70.9 140 37.9
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 2.2e-10 69.7 77 50.6
COL.COLO4_24165 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.9e-09 66.6 69 52.2
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.4e-09 66.2 107 42.1
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 9.2e-09 64.3 144 36.8
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.2e-08 63.9 140 36.4
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.2e-08 63.9 106 39.6
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 2.1e-08 63.2 73 49.3
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 3.5e-08 62.4 132 35.6
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 8.6e-07 57.8 103 35.9


User provided reference genes

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