Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.149 Carica papaya HOM05D007947 ORTHO05D010018 8.7e-34 146.4 72 100.0
THA.LOC109116600 Tarenaya hassleriana HOM05D007947 ORTHO05D010018 4.8e-24 114.0 72 77.8
COL.COLO4_30922 Corchorus olitorius HOM05D007947 ORTHO05D010018 5.3e-23 110.5 72 79.2
Duzib192G0353 Durio zibethinus HOM05D007947 ORTHO05D010018 1.2e-22 109.4 72 73.6
Carub.0001s2978 Capsella rubella HOM05D007947 ORTHO05D010018 3.8e-21 104.4 73 72.6
AT1G31335 Arabidopsis thaliana HOM05D007947 ORTHO05D010018 5.0e-21 104.0 73 72.6
RcHm_v2.0_Chr5g0018941 Rosa chinensis HOM05D007947 ORTHO05D010018 5.0e-21 104.0 74 74.3
Cfa013564 Carpinus fangiana HOM05D007947 ORTHO05D010018 8.4e-21 103.2 74 73.0
CARHR030800 Cardamine hirsuta HOM05D007947 ORTHO05D010018 1.1e-20 102.8 74 70.3
Gohir.D10G048700 Gossypium hirsutum HOM05D007947 ORTHO05D010018 1.1e-20 102.8 60 83.3
Sp1g27170 Schrenkiella parvula HOM05D007947 ORTHO05D010018 1.1e-20 102.8 73 68.5
BcaB03g13798 Brassica carinata HOM05D007947 ORTHO05D010018 1.4e-20 102.4 72 68.1
BolC7t41949H Brassica oleracea HOM05D007947 ORTHO05D010018 1.4e-20 102.4 72 68.1
QL05p063460 Quercus lobata HOM05D007947 ORTHO05D010018 1.4e-20 102.4 77 70.1
C07p14500 Brassica napus HOM05D007947 ORTHO05D010018 1.9e-20 102.1 74 71.6
CiPaw.10G111600 Carya illinoinensis HOM05D007947 ORTHO05D010018 1.9e-20 102.1 75 69.3
Manes.03G076700 Manihot esculenta HOM05D007947 ORTHO05D010018 2.5e-20 101.7 72 72.2
Haze_22181 Corylus avellana HOM05D007947 ORTHO05D010018 3.2e-20 101.3 74 73.0
AL1G49700 Arabidopsis lyrata HOM05D007947 ORTHO05D010018 4.2e-20 100.9 73 71.2
BraA07t28738Z Brassica rapa HOM05D007947 ORTHO05D010018 4.2e-20 100.9 73 67.1
Glyma.02G308300 Glycine max HOM05D007947 ORTHO05D010018 4.2e-20 100.9 76 63.2
BcaB07g32795 Brassica carinata HOM05D007947 ORTHO05D010018 5.5e-20 100.5 73 68.5
ClCG02G013940 Citrullus lanatus HOM05D007947 ORTHO05D010018 5.5e-20 100.5 69 73.9
Gorai.011G051800 Gossypium raimondii HOM05D007947 ORTHO05D010018 5.5e-20 100.5 60 81.7
TPR.G15070 Trifolium pratense HOM05D007947 ORTHO05D010018 7.1e-20 100.1 74 66.2
CANSAT35G0466 Cannabis sativa HOM05D007947 ORTHO05D010018 9.3e-20 99.8 64 73.4
BcaC05g27167 Brassica carinata HOM05D007947 ORTHO05D010018 1.2e-19 99.4 73 67.1
BolC5t31792H Brassica oleracea HOM05D007947 ORTHO05D010018 1.2e-19 99.4 73 67.1
Thhalv10009264m.g Eutrema salsugineum HOM05D007947 ORTHO05D010018 1.2e-19 99.4 73 67.1
Gohir.A10G047400 Gossypium hirsutum HOM05D007947 ORTHO05D010018 1.2e-19 99.4 65 76.9
TWI73G0356 Tripterygium wilfordii HOM05D007947 ORTHO05D010018 1.2e-19 99.4 76 72.4
A09p34910 Brassica napus HOM05D007947 ORTHO05D010018 1.6e-19 99.0 73 67.1
BraA09t39021Z Brassica rapa HOM05D007947 ORTHO05D010018 1.6e-19 99.0 73 67.1
PGR142G1313 Punica granatum HOM05D007947 ORTHO05D010018 1.6e-19 99.0 70 70.0
C05p30570 Brassica napus HOM05D007947 ORTHO05D010018 2.7e-19 98.2 73 67.1
MELO3C011733.2 Cucumis melo HOM05D007947 ORTHO05D010018 2.7e-19 98.2 72 66.7
Glyma.14G004800 Glycine max HOM05D007947 ORTHO05D010018 3.5e-19 97.8 72 63.9
CsaV3_5G006230 Cucumis sativus L. HOM05D007947 ORTHO05D010018 4.6e-19 97.4 72 66.7
Hma1.2p1_0326F.1_g126180 Hydrangea macrophylla HOM05D007947 ORTHO05D010018 6.1e-19 97.1 75 70.7
CSS0033410 Camellia sinensis var. sinensis HOM05D007947 ORTHO05D010018 7.9e-19 96.7 72 70.8
Ca_06479_v3 Cicer arietinum L. HOM05D007947 ORTHO05D010018 1.0e-18 96.3 66 68.2
FAN16G2050 Fragaria x ananassa HOM05D007947 ORTHO05D010018 1.0e-18 96.3 76 65.8
PGSC0003DMG400021235 Solanum tuberosum HOM05D007947 ORTHO05D010018 1.0e-18 96.3 72 66.7
TAR626G1269 Trochodendron aralioides HOM05D007947 ORTHO05D010018 1.0e-18 96.3 67 74.6
Eucgr.D01574 Eucalyptus grandis HOM05D007947 ORTHO05D010018 1.3e-18 95.9 66 71.2
LjContig00081g0013704 Lotus japonicus HOM05D007947 ORTHO05D010018 1.3e-18 95.9 65 64.6
Potri.001G082332 Populus trichocarpa HOM05D007947 ORTHO05D010018 1.3e-18 95.9 67 73.1
DCAR_007806 Daucus carota HOM05D007947 ORTHO05D010018 6.7e-18 93.6 76 68.4
Eucgr.E02008 Eucalyptus grandis HOM05D007947 ORTHO05D010018 6.7e-18 93.6 68 67.6
Phvul.008G288200 Phaseolus vulgaris HOM05D007947 ORTHO05D010018 6.7e-18 93.6 72 63.9
Nn7g37910 Nelumbo nucifera HOM05D007947 ORTHO05D010018 8.7e-18 93.2 67 68.7
Ciclev10017351m.g Citrus clementina HOM05D007947 ORTHO05D010018 1.1e-17 92.8 81 64.2
MD05G1260300 Malus domestica HOM05D007947 ORTHO05D010018 1.1e-17 92.8 72 68.1
MD10G1239200 Malus domestica HOM05D007947 ORTHO05D010018 1.5e-17 92.4 72 66.7
Potri.003G148100 Populus trichocarpa HOM05D007947 ORTHO05D010018 1.9e-17 92.0 67 70.1
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 1.9e-17 92.0 62 71.0
Duzib235G0890 Durio zibethinus HOM05D007947 ORTHO05D010018 2.5e-17 91.7 61 77.0
Prupe.4G105200 Prunus persica HOM05D007947 ORTHO05D010018 2.5e-17 91.7 72 66.7
Psat2g003200 Pisum sativum HOM05D007947 ORTHO05D010018 5.7e-17 90.5 72 63.9
Sabra03G0107800 Salix brachista HOM05D000054 ORTHO05D000171 7.4e-17 90.1 67 67.2
Cc09_g06500 Coffea canephora HOM05D007947 ORTHO05D010018 9.7e-17 89.7 54 79.6
Medtr5g098300 Medicago truncatula HOM05D007947 ORTHO05D010018 1.3e-16 89.4 72 61.1
Sopen02g018620 Solanum pennellii HOM05D007947 ORTHO05D010018 1.6e-16 89.0 54 77.8
Gohir.D09G076300 Gossypium hirsutum HOM05D007947 ORTHO05D010018 2.8e-16 88.2 74 60.8
Gorai.006G091500 Gossypium raimondii HOM05D007947 ORTHO05D010018 2.8e-16 88.2 74 60.8
FAN21G3705 Fragaria x ananassa HOM05D000217 ORTHO05D000121 6.3e-16 87.0 66 68.2
Migut.M01948 Erythranthe guttata HOM05D007947 ORTHO05D010018 8.2e-16 86.7 72 59.7
Gohir.A09G076300 Gossypium hirsutum HOM05D007947 ORTHO05D010018 8.2e-16 86.7 74 62.2
SalBow8G2047 Salvia bowleyana HOM05D007947 ORTHO05D010018 9.0e-15 83.2 69 58.0
Nn7g37911 Nelumbo nucifera HOM05D007947 ORTHO05D010018 1.5e-14 82.4 68 61.8
arahy.Tifrunner.gnm1.ann1.F2U9KI Arachis hypogaea HOM05D001153 ORTHO05D000949 2.6e-14 81.6 46 78.3
Lalb_Chr04g0247121 Lupinus albus HOM05D007947 ORTHO05D010018 1.9e-12 75.5 69 55.1
Sc09g0004070 Simmondsia chinensis HOM05D007947 ORTHO05D010018 3.2e-12 74.7 50 72.0
Ciclev10017780m.g Citrus clementina HOM05D007947 ORTHO05D010018 5.5e-12 73.9 40 77.5
Oeu030705.1 Olea europaea HOM05D007947 ORTHO05D010018 5.5e-12 73.9 65 58.5
Os03g0780200 Oryza sativa ssp. japonica HOM05D007947 ORTHO05D010018 5.5e-12 73.9 57 64.9
Zm00001eb057320 Zea mays HOM05D007947 ORTHO05D010018 1.2e-11 72.8 74 54.1
HanXRQChr16g0528851 Helianthus annuus HOM05D007947 ORTHO05D010018 1.4e-10 69.3 71 56.3
Zm00001eb213660 Zea mays HOM05D007947 ORTHO05D010018 2.0e-09 65.5 73 52.1
Medtr5g098270 Medicago truncatula HOM05D007947 ORTHO05D010018 2.5e-09 65.1 53 52.8
Zm00001eb059730 Zea mays HOM05D007947 ORTHO05D010018 7.4e-09 63.5 63 52.4
Glyma.19G182200 Glycine max HOM05D009309 ORTHO05D011491 6.3e-08 60.5 48 66.7
Glyma.03G181500 Glycine max HOM05D009309 ORTHO05D011491 1.1e-07 59.7 48 66.7
Phvul.001G177600 Phaseolus vulgaris HOM05D009309 ORTHO05D011491 1.4e-07 59.3 47 68.1
Lj1g0009603 Lotus japonicus HOM05D009309 ORTHO05D011491 4.1e-07 57.8 48 62.5
Manes.08G008300 Manihot esculenta HOM05D009309 ORTHO05D011491 6.9e-07 57.0 56 50.0
Sed0025248 Sechium edule HOM05D066588 ORTHO05D010018 9.1e-07 56.6 44 63.6
HanXRQChr14g0454561 Helianthus annuus HOM05D009309 ORTHO05D011491 1.2e-06 56.2 55 50.9
Sabra18G0012600 Salix brachista HOM05D003482 ORTHO05D010018 1.5e-06 55.8 35 77.1
Lsat_1_v5_gn_2_106500 Lactuca sativa HOM05D007947 ORTHO05D010018 4.5e-06 54.3 54 53.7
Dinv37295 Davidia involucrata HOM05D009309 ORTHO05D011491 5.9e-06 53.9 55 49.1
Migut.J00541 Erythranthe guttata HOM05D009309 ORTHO05D011491 5.9e-06 53.9 65 52.3


User provided reference genes

Program Settings