Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.7 Carica papaya HOM05D008017 ORTHO05D009829 1.9e-181 639.0 317 100.0
GSVIVG01011109001 Vitis vinifera HOM05D008017 ORTHO05D009829 2.7e-63 246.5 351 42.5
Thecc.01G282500 Theobroma cacao HOM05D008017 ORTHO05D009829 6.1e-63 245.4 339 44.0
Gohir.A11G121700 Gossypium hirsutum HOM05D008017 ORTHO05D009829 1.6e-60 237.3 335 43.3
Gohir.D11G126900 Gossypium hirsutum HOM05D008017 ORTHO05D009829 2.4e-59 233.4 341 42.2
Gorai.007G135600 Gossypium raimondii HOM05D008017 ORTHO05D009829 4.5e-58 229.2 346 40.8
Duzib133G1520 Durio zibethinus HOM05D008017 ORTHO05D009829 1.6e-55 220.7 319 43.6
TWI59G0151 Tripterygium wilfordii HOM05D008017 ORTHO05D009829 4.5e-50 202.6 354 39.0
Dinv32952 Davidia involucrata HOM05D008017 ORTHO05D009829 1.4e-46 191.0 359 37.6
QL12p022298 Quercus lobata HOM05D008017 ORTHO05D009829 5.2e-46 189.1 346 37.6
CSS0036401 Camellia sinensis var. sinensis HOM05D008017 ORTHO05D009829 4.1e-43 179.5 336 37.2
CiPaw.08G104100 Carya illinoinensis HOM05D008017 ORTHO05D009829 3.2e-40 169.9 349 36.7
Prupe.8G243500 Prunus persica HOM05D008017 ORTHO05D009829 2.7e-39 166.8 335 35.5
vmacro14930 Vaccinium macrocarpon HOM05D008017 ORTHO05D009829 2.3e-38 163.7 342 34.8
Cfa006117 Carpinus fangiana HOM05D008017 ORTHO05D009829 1.2e-37 161.4 348 35.9
MD03G1267700 Malus domestica HOM05D008017 ORTHO05D009829 3.3e-37 159.8 333 33.3
FAN20G2511 Fragaria x ananassa HOM05D008017 ORTHO05D009829 4.4e-37 159.5 331 36.6
RcHm_v2.0_Chr6g0291401 Rosa chinensis HOM05D008017 ORTHO05D009829 7.5e-37 158.7 334 35.9
FAN27G1723 Fragaria x ananassa HOM05D008017 ORTHO05D009829 9.7e-37 158.3 331 36.3
FvH4_2g23820 Fragaria vesca HOM05D008017 ORTHO05D009829 1.1e-35 154.8 332 34.9
Haze_04733 Corylus avellana HOM05D008017 ORTHO05D009829 1.6e-34 151.0 334 33.8
Rhsim01G0275500 Rhododendron simsii HOM05D008017 ORTHO05D009829 2.0e-34 150.6 358 33.0
COL.COLO4_09129 Corchorus olitorius HOM05D008017 ORTHO05D009829 1.1e-32 144.8 320 34.1
Ciclev10023515m.g Citrus clementina HOM05D008017 ORTHO05D009829 5.5e-32 142.5 326 33.7
Phvul.007G170200 Phaseolus vulgaris HOM05D008017 ORTHO05D009829 4.0e-30 136.3 343 32.4
VMungo0720G1670 Vigna mungo HOM05D008017 ORTHO05D009829 4.0e-30 136.3 343 32.4
THA.LOC104801223 Tarenaya hassleriana HOM05D008017 ORTHO05D009829 1.5e-29 134.4 344 32.6
FAN24G0680 Fragaria x ananassa HOM05D008017 ORTHO05D009829 7.5e-29 132.1 342 31.3
TAR362G0965 Trochodendron aralioides HOM05D001048 ORTHO05D009829 1.3e-28 131.3 298 35.2
FAN15G0771 Fragaria x ananassa HOM05D008017 ORTHO05D009829 1.8e-27 127.5 312 32.7
Lj5g0002267 Lotus japonicus HOM05D008017 ORTHO05D009829 1.6e-26 124.4 356 31.7
Oeu022877.1 Olea europaea HOM05D008017 ORTHO05D009829 2.7e-26 123.6 168 42.3
Atru.chr5.1386 Acer truncatum HOM05D008017 ORTHO05D009829 4.5e-26 122.9 245 36.3
CsaV3_6G037070 Cucumis sativus L. HOM05D008017 ORTHO05D009829 1.7e-25 120.9 333 26.7
Hma1.2p1_0257F.1_g103690 Hydrangea macrophylla HOM05D008017 ORTHO05D009829 1.7e-25 120.9 135 50.4
Lalb_Chr01g0020201 Lupinus albus HOM05D008017 ORTHO05D009829 2.9e-25 120.2 341 31.1
arahy.Tifrunner.gnm1.ann1.2M7N28 Arachis hypogaea HOM05D008017 ORTHO05D009829 6.5e-25 119.0 325 32.6
Lj2A1176T49 Lonicera japonica HOM05D008017 ORTHO05D009829 6.5e-25 119.0 186 36.0
arahy.Tifrunner.gnm1.ann1.D318AT Arachis hypogaea HOM05D008017 ORTHO05D009829 1.5e-24 117.9 325 32.3
Glyma.02G148500 Glycine max HOM05D008017 ORTHO05D009829 1.5e-24 117.9 343 31.8
ClCG07G000190 Citrullus lanatus HOM05D008017 ORTHO05D009829 7.2e-24 115.5 378 26.7
Ca_09767_v3 Cicer arietinum L. HOM05D008017 ORTHO05D009829 1.2e-23 114.8 317 32.8
Migut.D00274 Erythranthe guttata HOM05D008017 ORTHO05D009829 2.1e-23 114.0 335 30.1
Cc01_g19690 Coffea canephora HOM05D008017 ORTHO05D009829 3.6e-23 113.2 158 43.0
Sp2g28160 Schrenkiella parvula HOM05D008017 ORTHO05D009829 3.6e-23 113.2 293 30.7
Medtr1g072530 Medicago truncatula HOM05D008017 ORTHO05D009829 1.8e-22 110.9 354 29.7
SGA_v2.0_scaffold1G00455 Striga asiatica HOM05D008017 ORTHO05D009829 1.8e-22 110.9 156 37.8
Lsat_1_v5_gn_9_4200 Lactuca sativa HOM05D055571 ORTHO05D009829 6.8e-22 109.0 320 30.3
Nn4g26195 Nelumbo nucifera HOM05D001048 ORTHO05D009829 3.4e-21 106.7 303 29.0
TAR633G0828 Trochodendron aralioides HOM05D008017 ORTHO05D009829 9.8e-21 105.1 75 57.3
Aa31LG5G2480 Aethionema arabicum HOM05D008017 ORTHO05D009829 1.7e-20 104.4 304 28.9
MSTRG.18221 Avicennia marina HOM05D008017 ORTHO05D009829 1.7e-20 104.4 174 36.8
Peaxi162Scf00570g00051 Petunia axillaris HOM05D008017 ORTHO05D009829 8.3e-20 102.1 122 46.7
CANSAT25G3665 Cannabis sativa HOM05D008017 ORTHO05D009829 2.4e-19 100.5 348 31.0
Nn4g26194 Nelumbo nucifera HOM05D001048 ORTHO05D009829 3.1e-19 100.1 177 36.2
MELO3C014408.2 Cucumis melo HOM05D008017 ORTHO05D009829 7.0e-19 99.0 381 24.7
Thhalv10028830m.g Eutrema salsugineum HOM05D008017 ORTHO05D009829 2.0e-18 97.4 312 29.5
Nitab4.5_0001028g0180 Nicotiana tabacum HOM05D008017 ORTHO05D009829 2.7e-18 97.1 348 29.0
Solyc09g064920.3 Solanum lycopersicum HOM05D008017 ORTHO05D009829 2.7e-18 97.1 330 28.5
PGSC0003DMG400000958 Solanum tuberosum HOM05D008017 ORTHO05D009829 2.7e-18 97.1 330 28.5
HanXRQChr10g0282841 Helianthus annuus HOM05D008017 ORTHO05D009829 3.8e-17 93.2 129 42.6
BraA06t26123Z Brassica rapa HOM05D008017 ORTHO05D009829 5.0e-17 92.8 286 28.0
A06p31900 Brassica napus HOM05D008017 ORTHO05D009829 6.6e-17 92.4 288 29.5
C03p61050 Brassica napus HOM05D008017 ORTHO05D009829 8.6e-17 92.0 299 26.8
BolC3t18367H Brassica oleracea HOM05D008017 ORTHO05D009829 8.6e-17 92.0 299 26.8
Aqoxy2G03270 Aquilegia oxysepala HOM05D001048 ORTHO05D009829 1.1e-16 91.7 164 37.8
arahy.Tifrunner.gnm1.ann1.UF2TDU Arachis hypogaea HOM05D008017 ORTHO05D009829 1.5e-16 91.3 149 43.0
AL8G42480 Arabidopsis lyrata HOM05D008017 ORTHO05D009829 1.2e-15 88.2 292 29.5
TPR.G1572 Trifolium pratense HOM05D008017 ORTHO05D009829 2.1e-15 87.4 127 41.7
Psat6g060800 Pisum sativum HOM05D008017 ORTHO05D009829 2.8e-15 87.0 131 40.5
arahy.Tifrunner.gnm1.ann1.3EF69T Arachis hypogaea HOM05D008068 ORTHO05D009829 4.7e-15 86.3 150 41.3
Actinidia21104 Actinidia chinensis HOM05D001048 ORTHO05D009829 1.0e-14 85.1 211 33.6
PSO170G5150 Papaver somniferum HOM05D001048 ORTHO05D009829 1.0e-14 85.1 244 29.9
AT5G64980 Arabidopsis thaliana HOM05D008017 ORTHO05D009829 2.3e-14 84.0 300 26.7
AUR62039903 Chenopodium quinoa HOM05D008017 ORTHO05D009829 3.0e-14 83.6 165 33.9
AUR62036801 Chenopodium quinoa HOM05D008017 ORTHO05D009829 8.9e-14 82.0 165 33.3
Ah.15g091760 Amaranthus hybridus HOM05D003123 ORTHO05D003492 1.5e-13 81.3 157 34.4
Carub.0008s2581 Capsella rubella HOM05D008017 ORTHO05D009829 1.3e-12 78.2 287 27.5
Nitab4.5_0002386g0070 Nicotiana tabacum HOM05D008017 ORTHO05D009829 8.3e-12 75.5 329 26.1
Actinidia24882 Actinidia chinensis HOM05D008017 ORTHO05D009829 2.4e-11 73.9 55 63.6
Duzib168G2379 Durio zibethinus HOM05D001048 ORTHO05D000069 5.9e-10 69.3 183 31.7
Duzib150G1390 Durio zibethinus HOM05D001048 ORTHO05D000069 2.3e-09 67.4 187 30.5
unitig_22.g5255 Utricularia gibba HOM05D008017 ORTHO05D009829 3.9e-09 66.6 54 50.0
Ah.06g192360 Amaranthus hybridus HOM05D001048 ORTHO05D000069 2.5e-08 63.9 115 37.4
ATR0626G011 Amborella trichopoda HOM05D001048 ORTHO05D009829 2.5e-08 63.9 110 33.6
Nn3g19502 Nelumbo nucifera HOM05D001048 ORTHO05D000069 1.6e-07 61.2 117 36.8
Nitab4.5_0004815g0010 Nicotiana tabacum HOM05D001048 ORTHO05D000069 2.1e-07 60.8 135 33.3
Glyma.17G075200 Glycine max HOM05D001048 ORTHO05D000069 3.6e-07 60.1 234 27.8
Zm00001eb312850 Zea mays HOM05D001048 ORTHO05D000069 8.0e-07 58.9 150 30.0
Oeu021260.2 Olea europaea HOM05D001048 ORTHO05D000069 1.4e-06 58.2 185 29.7
PSO724G0466 Papaver somniferum HOM05D001048 ORTHO05D000069 1.4e-06 58.2 142 32.4
PSO135G0322 Papaver somniferum HOM05D001048 ORTHO05D000069 1.8e-06 57.8 127 30.7
Zm00001eb099470 Zea mays HOM05D001048 ORTHO05D000069 2.3e-06 57.4 154 29.2
Haze_19228 Corylus avellana HOM05D001048 ORTHO05D000069 3.1e-06 57.0 222 29.7
HanXRQChr05g0133251 Helianthus annuus HOM05D001048 ORTHO05D000069 4.0e-06 56.6 135 34.1
QL02p092804 Quercus lobata HOM05D001048 ORTHO05D000069 4.0e-06 56.6 225 27.6
Cfa020843 Carpinus fangiana HOM05D001048 ORTHO05D000069 5.2e-06 56.2 227 29.1
CDE05G1450 Ceratophyllum demersum HOM05D001048 ORTHO05D000069 5.2e-06 56.2 146 32.9
CDE05G2306 Ceratophyllum demersum HOM05D001048 ORTHO05D000069 5.2e-06 56.2 146 32.9
HPP92_017482 Vanilla planifolia HOM05D001048 ORTHO05D000069 5.2e-06 56.2 148 31.1
Gohir.D06G097200 Gossypium hirsutum HOM05D001048 ORTHO05D000069 6.8e-06 55.8 157 30.6
Phvul.003G157100 Phaseolus vulgaris HOM05D001048 ORTHO05D000069 6.8e-06 55.8 196 28.1
ECA240G0996 Erigeron canadensis HOM05D001048 ORTHO05D000069 8.9e-06 55.5 190 28.9
Gohir.A06G096700 Gossypium hirsutum HOM05D001048 ORTHO05D000069 8.9e-06 55.5 157 30.6
SalBow1G8475 Salvia bowleyana HOM05D001048 ORTHO05D000069 8.9e-06 55.5 158 29.7


User provided reference genes

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