Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 2.6e-89 332.0 165 100.0
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 4.6e-54 214.9 171 65.5
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 4.7e-51 204.9 141 68.8
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.1e-50 203.8 170 65.9
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-50 203.4 130 73.1
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 3.1e-50 202.2 145 65.5
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 4.0e-50 201.8 130 72.3
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 8.9e-50 200.7 162 63.0
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 2.0e-49 199.5 140 69.3
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.0e-49 199.5 169 59.8
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 5.8e-49 198.0 172 60.5
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.7e-48 196.4 173 57.8
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 2.2e-48 196.1 125 71.2
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 2.9e-48 195.7 157 65.0
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 8.3e-48 194.1 132 72.0
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 3.2e-47 192.2 168 63.7
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 7.1e-47 191.0 130 70.0
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.2e-46 190.3 130 70.8
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.2e-46 190.3 171 59.1
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.6e-46 189.9 145 66.2
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 2.1e-46 189.5 135 65.2
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 6.0e-46 188.0 164 59.8
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 7.8e-46 187.6 173 59.0
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.0e-45 187.2 131 67.9
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 1.3e-45 186.8 138 66.7
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.3e-45 186.8 167 60.5
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.3e-45 186.8 161 59.6
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.7e-45 186.4 159 60.4
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 3.0e-45 185.7 175 60.0
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 5.1e-45 184.9 165 57.6
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 5.1e-45 184.9 170 60.0
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 6.6e-45 184.5 172 58.7
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 6.6e-45 184.5 131 68.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 8.6e-45 184.1 131 67.9
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.1e-44 183.7 167 59.3
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.1e-44 183.7 162 56.8
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.1e-44 183.7 162 58.0
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.5e-44 183.3 164 61.0
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 2.5e-44 182.6 164 61.0
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 3.3e-44 182.2 168 58.9
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.3e-44 182.2 167 59.3
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 3.3e-44 182.2 134 67.2
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 3.3e-44 182.2 133 66.9
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.3e-44 181.0 156 61.5
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 7.3e-44 181.0 150 62.0
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 9.5e-44 180.6 137 65.7
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 9.5e-44 180.6 139 64.7
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.2e-43 180.3 163 56.4
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 2.8e-43 179.1 139 63.3
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 2.8e-43 179.1 155 58.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 3.6e-43 178.7 164 56.7
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 3.6e-43 178.7 139 63.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 3.6e-43 178.7 164 56.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 3.6e-43 178.7 164 56.7
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 3.6e-43 178.7 119 71.4
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 8.1e-43 177.6 167 56.3
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 1.1e-42 177.2 127 63.0
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 1.4e-42 176.8 128 63.3
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 1.8e-42 176.4 164 56.7
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 1.8e-42 176.4 164 56.7
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 5.2e-42 174.9 152 58.6
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 5.2e-42 174.9 106 75.5
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 6.8e-42 174.5 132 65.2
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 6.8e-42 174.5 140 62.1
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.2e-41 173.7 117 70.1
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 1.2e-41 173.7 140 62.9
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.2e-41 173.7 168 55.4
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 1.2e-41 173.7 173 53.8
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 2.6e-41 172.6 107 71.0
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 7.6e-41 171.0 174 53.4
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.7e-40 169.9 201 51.2
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.7e-40 169.9 141 60.3
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 8.4e-40 167.5 165 53.9
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 7.1e-39 164.5 106 69.8
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 7.1e-39 164.5 154 55.8
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 7.1e-39 164.5 101 73.3
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 7.8e-38 161.0 196 51.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.3e-37 160.2 122 64.8
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.3e-37 159.5 163 52.8
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 1.5e-36 156.8 137 55.5
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.9e-36 156.4 184 49.5
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 2.1e-35 152.9 100 69.0
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.1e-34 150.6 94 72.3
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 3.1e-34 149.1 102 69.6
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 2.6e-33 146.0 98 68.4
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 3.4e-33 145.6 88 75.0
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 4.4e-33 145.2 109 67.9
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 7.6e-33 144.4 145 57.9
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 3.8e-32 142.1 109 67.0
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 4.2e-31 138.7 144 55.6
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 2.1e-30 136.3 92 71.7
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 3.5e-30 135.6 105 57.1
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 4.6e-30 135.2 100 58.0
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 6.0e-30 134.8 94 63.8
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 1.0e-29 134.0 94 63.8
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.6e-27 126.7 97 58.8
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 4.0e-26 122.1 157 46.5
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.2e-22 110.5 72 72.2
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.3e-21 107.1 78 64.1
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.8e-18 96.7 69 62.3
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 8.4e-16 87.8 60 70.0
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 4.2e-15 85.5 175 38.3
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 7.1e-15 84.7 100 49.0
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 6.7e-13 78.2 95 49.5
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 8.7e-13 77.8 169 33.7
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.4e-10 69.7 73 49.3
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 2.6e-09 66.2 109 44.0


User provided reference genes

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