Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.48 Carica papaya HOM05D003798 ORTHO05D004652 5.9e-95 350.9 183 100.0
Duzib133G0734 Durio zibethinus HOM05D003798 ORTHO05D004652 1.4e-67 260.0 169 79.9
Gohir.A11G123400 Gossypium hirsutum HOM05D003798 ORTHO05D004652 6.8e-67 257.7 169 79.3
Gohir.D11G128600 Gossypium hirsutum HOM05D003798 ORTHO05D004652 6.8e-67 257.7 169 79.3
Gorai.007G137600 Gossypium raimondii HOM05D003798 ORTHO05D004652 6.8e-67 257.7 169 79.3
Ciclev10019577m.g Citrus clementina HOM05D003798 ORTHO05D004652 1.5e-66 256.5 166 78.3
Thecc.01G277100 Theobroma cacao HOM05D003798 ORTHO05D004652 1.5e-66 256.5 169 77.5
Atru.chr5.1458 Acer truncatum HOM05D003798 ORTHO05D004652 4.9e-65 251.5 169 74.6
Gohir.D08G204500 Gossypium hirsutum HOM05D003798 ORTHO05D004652 3.2e-64 248.8 169 74.6
Gorai.004G216500 Gossypium raimondii HOM05D003798 ORTHO05D004652 3.2e-64 248.8 169 74.6
Dinv34765 Davidia involucrata HOM05D003798 ORTHO05D004652 7.8e-63 244.2 166 74.1
CSS0013750 Camellia sinensis var. sinensis HOM05D003798 ORTHO05D004652 1.0e-62 243.8 169 73.4
Gohir.A08G186400 Gossypium hirsutum HOM05D003798 ORTHO05D004652 1.0e-62 243.8 169 73.4
CsaV3_7G028050 Cucumis sativus L. HOM05D003798 ORTHO05D004652 3.0e-62 242.3 166 71.7
CANSAT25G1654 Cannabis sativa HOM05D003798 ORTHO05D004652 3.9e-62 241.9 169 71.0
CiPaw.07G090900 Carya illinoinensis HOM05D003798 ORTHO05D004652 3.9e-62 241.9 165 73.9
Dinv32922 Davidia involucrata HOM05D003798 ORTHO05D004652 7.3e-61 237.7 166 71.7
TAR636G1714 Trochodendron aralioides HOM05D003798 ORTHO05D004652 7.3e-61 237.7 169 73.4
Sed0016197 Sechium edule HOM05D003798 ORTHO05D004652 1.2e-60 236.9 165 73.9
Potri.002G051800 Populus trichocarpa HOM05D003798 ORTHO05D004652 8.9e-59 230.7 164 73.8
QL12p021373 Quercus lobata HOM05D003798 ORTHO05D004652 8.9e-59 230.7 161 72.0
Prupe.8G239400 Prunus persica HOM05D003798 ORTHO05D004652 1.2e-58 230.3 168 69.0
CSS0049215 Camellia sinensis var. sinensis HOM05D003798 ORTHO05D004652 2.0e-58 229.6 169 69.2
Phvul.001G152400 Phaseolus vulgaris HOM05D003798 ORTHO05D004652 3.4e-58 228.8 167 70.1
Cfa006156 Carpinus fangiana HOM05D003798 ORTHO05D004652 7.5e-58 227.6 166 69.9
Glyma.03G155100 Glycine max HOM05D003798 ORTHO05D004652 7.5e-58 227.6 167 70.7
Glyma.19G157300 Glycine max HOM05D003798 ORTHO05D004652 7.5e-58 227.6 167 70.1
Lalb_Chr06g0162961 Lupinus albus HOM05D003798 ORTHO05D004652 7.5e-58 227.6 166 70.5
VMungo1383G1837 Vigna mungo HOM05D003798 ORTHO05D004652 7.5e-58 227.6 167 69.5
Rhsim13G0025900 Rhododendron simsii HOM05D003798 ORTHO05D004652 2.9e-57 225.7 166 69.9
arahy.Tifrunner.gnm1.ann1.PW6FZP Arachis hypogaea HOM05D003798 ORTHO05D004652 2.4e-56 222.6 166 69.3
arahy.Tifrunner.gnm1.ann1.Y8QVM3 Arachis hypogaea HOM05D003798 ORTHO05D004652 2.4e-56 222.6 166 69.3
Eucgr.H01469 Eucalyptus grandis HOM05D003798 ORTHO05D004652 3.5e-55 218.8 167 67.1
MD03G1263100 Malus domestica HOM05D003798 ORTHO05D004652 4.6e-55 218.4 168 67.3
vmacro02581 Vaccinium macrocarpon HOM05D003798 ORTHO05D004652 6.0e-55 218.0 166 68.1
Lj5g0015989 Lotus japonicus HOM05D003798 ORTHO05D004652 7.8e-55 217.6 166 66.9
Nn4g26293 Nelumbo nucifera HOM05D003798 ORTHO05D004652 2.3e-54 216.1 165 66.1
RcHm_v2.0_Chr6g0290801 Rosa chinensis HOM05D003798 ORTHO05D004652 1.1e-53 213.8 162 67.9
ClCG09G007110 Citrullus lanatus HOM05D003798 ORTHO05D004652 1.5e-53 213.4 192 60.9
PGR119G1379 Punica granatum HOM05D003798 ORTHO05D004652 4.3e-53 211.8 168 64.9
Lj2A1170T17 Lonicera japonica HOM05D003798 ORTHO05D004652 7.3e-53 211.1 177 62.1
MD11G1283900 Malus domestica HOM05D003798 ORTHO05D004652 9.5e-53 210.7 168 66.1
Sc05g0005620 Simmondsia chinensis HOM05D003798 ORTHO05D004652 6.2e-52 208.0 166 65.1
FvH4_2g23360 Fragaria vesca HOM05D003798 ORTHO05D004652 6.8e-51 204.5 161 67.1
FAN24G3171 Fragaria x ananassa HOM05D003798 ORTHO05D004652 6.8e-51 204.5 161 67.1
Lj1g0003787 Lotus japonicus HOM05D003798 ORTHO05D004652 6.8e-51 204.5 166 63.3
FAN27G1242 Fragaria x ananassa HOM05D003798 ORTHO05D004652 1.2e-50 203.8 161 67.1
GSVIVG01001160001 Vitis vinifera HOM05D003798 ORTHO05D004652 1.2e-50 203.8 169 62.1
Ca_08607_v3 Cicer arietinum L. HOM05D003798 ORTHO05D004652 2.6e-50 202.6 159 67.9
FAN20G2449 Fragaria x ananassa HOM05D003798 ORTHO05D004652 2.6e-50 202.6 161 66.5
FAN15G2405 Fragaria x ananassa HOM05D003798 ORTHO05D004652 1.7e-49 199.9 162 66.7
Psat3g063960 Pisum sativum HOM05D003798 ORTHO05D004652 4.9e-49 198.4 159 66.0
Aqoxy2G03370 Aquilegia oxysepala HOM05D003798 ORTHO05D004652 1.1e-48 197.2 167 64.1
TWI23G0664 Tripterygium wilfordii HOM05D003798 ORTHO05D004652 1.4e-48 196.8 163 62.0
DCAR_002728 Daucus carota HOM05D003798 ORTHO05D004652 1.9e-48 196.4 166 58.4
Haze_04695 Corylus avellana HOM05D003798 ORTHO05D004652 3.2e-48 195.7 166 63.3
TWI59G0387 Tripterygium wilfordii HOM05D003798 ORTHO05D004652 2.1e-47 193.0 163 62.0
Potri.005G210500 Populus trichocarpa HOM05D003798 ORTHO05D004652 4.6e-47 191.8 145 69.0
TPR.G9912 Trifolium pratense HOM05D003798 ORTHO05D004652 7.8e-47 191.0 160 66.2
Medtr4g095000 Medicago truncatula HOM05D003798 ORTHO05D004652 3.9e-46 188.7 159 62.9
COL.COLO4_09077 Corchorus olitorius HOM05D003798 ORTHO05D004652 6.6e-46 188.0 151 68.2
HanXRQChr15g0466731 Helianthus annuus HOM05D003798 ORTHO05D004652 9.6e-45 184.1 163 59.5
Medtr7g095030 Medicago truncatula HOM05D003798 ORTHO05D004652 1.6e-44 183.3 159 62.3
ECA248G1795 Erigeron canadensis HOM05D003798 ORTHO05D004652 2.8e-44 182.6 158 58.2
Actinidia00771 Actinidia chinensis HOM05D003798 ORTHO05D004652 3.4e-42 175.6 140 62.9
PSO210G1981 Papaver somniferum HOM05D003798 ORTHO05D004652 4.4e-42 175.3 166 58.4
PSO761G0144 Papaver somniferum HOM05D003798 ORTHO05D004652 4.4e-42 175.3 166 59.0
Actinidia09127 Actinidia chinensis HOM05D003798 ORTHO05D004652 7.6e-42 174.5 133 66.2
Oeu047871.2 Olea europaea HOM05D003798 ORTHO05D004652 4.9e-41 171.8 178 55.1
Sabra05G0160700 Salix brachista HOM05D003798 ORTHO05D004652 5.4e-40 168.3 191 52.9
Lsat_1_v5_gn_5_184661 Lactuca sativa HOM05D003798 ORTHO05D004652 3.9e-38 162.2 155 54.2
Migut.D00308 Erythranthe guttata HOM05D003798 ORTHO05D004652 3.3e-37 159.1 164 54.9
CAN.G1549.7 Capsicum annuum HOM05D003798 ORTHO05D004652 3.1e-35 152.5 135 61.5
Nitab4.5_0000759g0210 Nicotiana tabacum HOM05D003798 ORTHO05D004652 4.2e-32 142.1 160 51.9
HanXRQChr01g0003001 Helianthus annuus HOM05D003798 ORTHO05D004652 2.1e-31 139.8 151 52.3
ATR0332G031 Amborella trichopoda HOM05D003798 ORTHO05D004652 6.7e-30 134.8 152 47.4
Nitab4.5_0024519g0010 Nicotiana tabacum HOM05D003798 ORTHO05D004652 3.3e-29 132.5 139 54.7
Lj1A47G33 Lonicera japonica HOM05D003798 ORTHO05D004652 6.9e-27 124.8 121 57.0
Manes.05G077300 Manihot esculenta HOM05D003798 ORTHO05D004652 1.2e-26 124.0 67 88.1
SGA_v2.0_scaffold1G00488 Striga asiatica HOM05D003798 ORTHO05D004652 7.6e-26 121.3 161 46.0
unitig_749.g13741 Utricularia gibba HOM05D003798 ORTHO05D004652 8.4e-25 117.9 111 51.4
arahy.Tifrunner.gnm1.ann1.SSYA5T Arachis hypogaea HOM05D003798 ORTHO05D004652 3.3e-21 105.9 91 58.2
Lsat_1_v5_gn_4_62701 Lactuca sativa HOM05D003798 ORTHO05D004652 3.3e-21 105.9 88 59.1
THA.LOC104801240 Tarenaya hassleriana HOM05D003798 ORTHO05D004652 2.7e-15 86.3 89 48.3
Lsat_1_v5_gn_8_56480 Lactuca sativa HOM05D003798 ORTHO05D004652 7.9e-15 84.7 114 43.0
MELO3C015825.2 Cucumis melo HOM05D003798 ORTHO05D004652 6.7e-14 81.6 46 80.4
Actinidia24901 Actinidia chinensis HOM05D003798 ORTHO05D004652 1.1e-13 80.9 59 62.7
CARHR251100 Cardamine hirsuta HOM05D003798 ORTHO05D004652 1.9e-13 80.1 94 44.7
BraA03t12263Z Brassica rapa HOM05D000596 ORTHO05D002115 3.3e-13 79.3 93 43.0
BcaC01g06734 Brassica carinata HOM05D003798 ORTHO05D004652 5.7e-13 78.6 93 41.9
A03p30850 Brassica napus HOM05D000596 ORTHO05D002115 5.7e-13 78.6 93 41.9
C03p37610 Brassica napus HOM05D003798 ORTHO05D004652 5.7e-13 78.6 93 41.9
BcaC04g24012 Brassica carinata HOM05D003798 ORTHO05D004652 7.4e-13 78.2 93 43.0
C09p02260 Brassica napus HOM05D003798 ORTHO05D004652 7.4e-13 78.2 93 43.0
BolC3t16051H Brassica oleracea HOM05D003798 ORTHO05D004652 7.4e-13 78.2 93 41.9
BolC9t53155H Brassica oleracea HOM05D003798 ORTHO05D004652 7.4e-13 78.2 93 43.0
C03p37600 Brassica napus HOM05D003798 ORTHO05D004652 2.2e-12 76.6 93 39.8
Carub.0006s3431 Capsella rubella HOM05D003798 ORTHO05D004652 3.7e-12 75.9 88 43.2
arahy.Tifrunner.gnm1.ann1.97IXSS Arachis hypogaea HOM05D003798 ORTHO05D004652 8.2e-12 74.7 53 67.9
AL1084U10010 Arabidopsis lyrata HOM05D003798 ORTHO05D004652 1.1e-11 74.3 91 40.7
A09p02180 Brassica napus HOM05D003798 ORTHO05D004652 1.1e-11 74.3 99 40.4
AT4G02740 Arabidopsis thaliana HOM05D003798 ORTHO05D004652 2.4e-11 73.2 112 41.1
AL6G50220 Arabidopsis lyrata HOM05D003798 ORTHO05D004652 9.0e-11 71.2 108 40.7
Thhalv10028579m.g Eutrema salsugineum HOM05D003798 ORTHO05D004652 9.0e-11 71.2 90 41.1
Sp6g02760 Schrenkiella parvula HOM05D003798 ORTHO05D004652 9.0e-11 71.2 89 41.6
BcaB01g02007 Brassica carinata HOM05D003798 ORTHO05D004652 1.2e-10 70.9 93 39.8
BraA09t35866Z Brassica rapa HOM05D003798 ORTHO05D004652 1.5e-10 70.5 88 40.9
Carub.0006s3430 Capsella rubella HOM05D003798 ORTHO05D004652 2.6e-10 69.7 144 35.4
BcaC01g06735 Brassica carinata HOM05D003798 ORTHO05D004652 3.4e-10 69.3 93 37.6
C03p37620 Brassica napus HOM05D003798 ORTHO05D004652 3.4e-10 69.3 119 35.3
BolC3t16054H Brassica oleracea HOM05D003798 ORTHO05D004652 5.9e-10 68.6 93 37.6
A09p02170 Brassica napus HOM05D003798 ORTHO05D004652 1.0e-09 67.8 89 39.3
C03p37640 Brassica napus HOM05D003798 ORTHO05D004652 1.0e-09 67.8 93 37.6
BraA09t35865Z Brassica rapa HOM05D003798 ORTHO05D004652 1.0e-09 67.8 89 39.3
Carub.0006s3435 Capsella rubella HOM05D003798 ORTHO05D004652 1.0e-09 67.8 130 36.9
Sp6g02780 Schrenkiella parvula HOM05D003798 ORTHO05D004652 1.0e-09 67.8 136 36.8
BraA03t12264Z Brassica rapa HOM05D003798 ORTHO05D004652 1.3e-09 67.4 104 34.6
Carub.0006s3432 Capsella rubella HOM05D003798 ORTHO05D004652 1.7e-09 67.0 98 34.7
A03p30870 Brassica napus HOM05D003798 ORTHO05D004652 2.2e-09 66.6 104 33.7
AL6G50260 Arabidopsis lyrata HOM05D003798 ORTHO05D004652 5.0e-09 65.5 89 40.4
Lsat_1_v5_gn_4_100581 Lactuca sativa HOM05D003798 ORTHO05D004652 5.0e-09 65.5 46 65.2
DCAR_012485 Daucus carota HOM05D003798 ORTHO05D004652 8.5e-09 64.7 160 33.1
Thhalv10029278m.g Eutrema salsugineum HOM05D003798 ORTHO05D004652 1.1e-08 64.3 107 37.4
Sp6g02720 Schrenkiella parvula HOM05D003798 ORTHO05D004652 2.5e-08 63.2 86 40.7
AT4G02760 Arabidopsis thaliana HOM05D003798 ORTHO05D004652 4.2e-08 62.4 133 36.1
CARHR251080 Cardamine hirsuta HOM05D003798 ORTHO05D004652 1.2e-07 60.8 107 38.3
Aa31LG8G1370 Aethionema arabicum HOM05D003798 ORTHO05D004652 6.1e-07 58.5 88 35.2
Lsat_1_v5_gn_8_57021 Lactuca sativa HOM05D003798 ORTHO05D004652 6.1e-07 58.5 58 50.0
AL6G50180 Arabidopsis lyrata HOM05D003798 ORTHO05D004652 1.0e-06 57.8 133 35.3
Sp6g02730 Schrenkiella parvula HOM05D003798 ORTHO05D004652 2.3e-06 56.6 88 31.8
CBR_g46206 Chara braunii HOM05D003798 ORTHO05D004652 3.0e-06 56.2 55 45.5
BcaB07g33030 Brassica carinata HOM05D003798 ORTHO05D004652 8.8e-06 54.7 64 37.5


User provided reference genes

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