Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.1e-69 266.5 135 100.0
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 6.4e-46 187.6 135 68.9
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 6.4e-46 187.6 135 68.9
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 8.3e-46 187.2 135 67.4
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 2.4e-45 185.7 133 67.7
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 4.1e-45 184.9 135 68.9
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 4.1e-45 184.9 135 67.4
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 2.1e-44 182.6 127 70.1
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.0e-43 180.3 114 72.8
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 5.1e-43 177.9 135 65.9
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.5e-42 175.6 113 73.5
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 4.3e-42 174.9 125 65.6
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 4.3e-42 174.9 128 64.8
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 5.6e-42 174.5 125 68.8
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 7.3e-42 174.1 113 72.6
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.2e-41 173.3 136 64.0
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.2e-41 173.3 120 69.2
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.6e-41 172.9 133 63.2
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.6e-41 172.9 133 63.9
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.6e-41 172.9 136 64.7
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.1e-41 172.6 122 69.7
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.1e-41 172.6 129 64.3
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 4.7e-41 171.4 133 60.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.1e-40 170.2 130 66.2
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.4e-40 169.9 128 64.1
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.8e-40 169.5 128 67.2
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 2.3e-40 169.1 132 62.1
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 3.1e-40 168.7 131 62.6
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 3.1e-40 168.7 124 62.9
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 4.0e-40 168.3 128 66.4
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 8.9e-40 167.2 128 63.3
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 8.9e-40 167.2 132 61.4
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.2e-39 166.8 128 64.8
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 1.5e-39 166.4 126 63.5
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.5e-39 166.4 135 63.0
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 3.4e-39 165.2 129 61.2
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 7.6e-39 164.1 135 58.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.7e-38 162.9 112 67.0
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 3.8e-38 161.8 128 62.5
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 6.4e-38 161.0 127 59.1
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 6.4e-38 161.0 128 59.4
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.4e-38 161.0 130 62.3
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 8.4e-38 160.6 124 65.3
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.1e-37 160.2 120 65.0
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 3.2e-37 158.7 134 58.2
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.4e-37 157.9 117 62.4
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 2.7e-36 155.6 126 61.9
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 6.6e-35 151.0 121 62.0
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 8.6e-35 150.6 122 59.0
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 8.6e-35 150.6 132 55.3
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 1.1e-34 150.2 129 62.0
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.9e-34 149.4 125 60.0
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.9e-34 149.4 126 56.3
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.9e-34 149.4 138 55.1
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.5e-34 149.1 126 56.3
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 5.6e-34 147.9 126 58.7
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 9.6e-34 147.1 121 61.2
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.6e-33 146.4 137 55.5
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 2.1e-33 146.0 136 58.1
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.1e-33 146.0 135 54.8
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.1e-33 146.0 135 54.8
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 3.6e-33 145.2 137 54.7
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 4.7e-33 144.8 120 60.8
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.1e-32 142.1 137 54.0
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.6e-31 137.5 133 56.4
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.4e-29 133.3 112 56.2
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 1.5e-26 123.2 105 60.0
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.5e-26 123.2 122 51.6
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 2.5e-26 122.5 131 47.3
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 4.8e-25 118.2 137 48.2
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.4e-24 116.7 117 53.0
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.4e-24 116.7 120 51.7
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.8e-24 116.3 115 51.3
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.5e-23 113.2 115 47.8
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 5.8e-23 111.3 105 50.5
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.3e-22 110.2 109 49.5
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.7e-22 109.8 134 45.5
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.2e-22 109.4 122 41.8
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.4e-22 107.8 117 42.7
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.4e-22 107.8 128 43.8
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 2.4e-21 105.9 127 42.5
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.2e-21 105.1 128 44.5
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-20 103.6 109 46.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.1e-20 102.8 128 42.2
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.7e-20 102.4 126 42.9
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 4.6e-20 101.7 129 45.0
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.0e-20 101.3 110 47.3
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.8e-19 99.8 138 43.5
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.3e-19 99.4 125 43.2
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.3e-18 95.5 129 38.8
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.3e-17 93.6 93 53.8
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.6e-17 92.0 125 40.8
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 8.1e-17 90.9 81 53.1
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.1e-16 89.0 103 41.7
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.3e-16 88.2 135 36.3
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 5.3e-16 88.2 128 37.5
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 9.0e-16 87.4 120 45.8
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.2e-15 87.0 97 42.3
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.6e-15 85.9 137 35.8
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.5e-15 85.1 118 37.3
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.2e-14 82.8 55 69.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-14 82.8 82 52.4
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.9e-14 81.6 116 37.9
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 1.1e-13 80.5 109 41.3
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 6.0e-12 74.7 110 33.6
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 6.0e-12 74.7 110 33.6
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.3e-11 73.6 95 42.1
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-10 70.1 111 37.8
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 5.6e-10 68.2 132 32.6
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 4.8e-09 65.1 125 32.0
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.8e-09 65.1 130 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 6.2e-09 64.7 116 35.3
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 3.1e-08 62.4 109 34.9
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 6.9e-08 61.2 105 30.5
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 1.2e-07 60.5 82 42.7
Duzib160G0834 Durio zibethinus HOM05D000022 ORTHO05D000071 2.2e-06 56.2 111 35.1
Lj5g0003096 Lotus japonicus HOM05D000022 ORTHO05D000071 4.9e-06 55.1 111 36.9
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 8.4e-06 54.3 112 33.9


User provided reference genes

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