Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 1.2e-106 389.8 198 100.0
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 3.4e-72 275.4 183 74.9
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 2.9e-71 272.3 185 77.3
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 1.1e-70 270.4 188 75.0
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 5.5e-70 268.1 183 74.3
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 4.6e-69 265.0 188 71.3
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 4.6e-69 265.0 183 73.8
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.8e-68 263.1 183 72.7
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 3.9e-68 261.9 183 74.9
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 5.6e-67 258.1 187 73.3
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 3.7e-66 255.4 183 71.0
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.4e-65 253.4 188 69.7
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 4.0e-65 251.9 183 70.5
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 5.3e-65 251.5 188 72.9
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 7.6e-64 247.7 183 68.9
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.0e-63 247.3 187 71.1
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.1e-62 243.8 186 68.8
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 1.1e-62 243.8 216 61.1
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 2.5e-62 242.7 199 65.3
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 4.2e-62 241.9 194 68.6
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 7.1e-62 241.1 199 64.3
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 1.6e-61 240.0 184 64.7
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 1.6e-61 240.0 183 65.0
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 3.5e-61 238.8 180 70.0
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 1.1e-59 233.8 185 67.0
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 1.5e-59 233.4 186 64.0
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 1.5e-59 233.4 190 65.3
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 2.5e-59 232.6 185 65.4
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 7.4e-59 231.1 190 65.3
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.3e-58 230.3 190 64.7
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 1.3e-58 230.3 190 63.7
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 2.1e-58 229.6 190 64.7
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 2.8e-58 229.2 186 65.1
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 2.8e-58 229.2 185 63.8
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 2.8e-58 229.2 188 63.3
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 1.4e-57 226.9 186 65.6
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 2.4e-57 226.1 191 63.4
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 4.1e-57 225.3 186 64.0
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 4.1e-57 225.3 185 61.6
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 5.3e-57 224.9 184 64.1
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 9.0e-57 224.2 208 58.2
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 1.5e-56 223.4 179 63.1
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.0e-56 223.0 188 62.2
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.4e-56 222.2 191 62.8
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 1.0e-55 220.7 208 57.7
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 1.3e-55 220.3 182 62.1
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 1.7e-55 219.9 193 61.7
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 2.9e-55 219.2 189 62.4
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 2.9e-55 219.2 189 62.4
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.9e-55 219.2 209 56.9
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 6.5e-55 218.0 191 61.8
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 8.4e-55 217.6 189 61.9
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 8.4e-55 217.6 189 61.9
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 3.2e-54 215.7 194 59.8
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 5.5e-54 214.9 202 59.9
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 3.5e-53 212.2 184 59.2
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.5e-53 212.2 206 59.7
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 4.6e-53 211.8 186 60.2
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 4.6e-53 211.8 149 71.8
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 6.1e-53 211.5 211 54.5
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 6.1e-53 211.5 187 61.0
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.3e-52 210.3 213 57.7
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.3e-52 210.3 186 59.7
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 1.8e-52 209.9 185 58.4
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 2.3e-52 209.5 194 60.8
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 2.3e-52 209.5 204 57.4
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 3.9e-52 208.8 186 61.3
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 3.9e-52 208.8 183 60.1
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 2.5e-51 206.1 182 59.9
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 2.5e-51 206.1 196 54.1
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 2.5e-51 206.1 153 67.3
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 2.5e-51 206.1 189 60.3
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.3e-51 205.7 181 61.9
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 3.3e-51 205.7 187 59.4
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 3.3e-51 205.7 198 54.0
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 5.7e-51 204.9 170 62.9
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 5.7e-51 204.9 188 58.0
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 9.7e-51 204.1 189 59.8
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.2e-50 203.0 168 62.5
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 2.2e-50 203.0 186 54.8
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 6.3e-50 201.4 197 57.9
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 4.1e-49 198.7 204 54.4
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 7.7e-48 194.5 185 56.2
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 5.0e-47 191.8 207 52.2
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 1.4e-46 190.3 143 65.7
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.9e-46 189.9 147 64.6
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 9.4e-46 187.6 140 67.9
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 2.7e-45 186.0 145 65.5
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 3.6e-45 185.7 165 63.6
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.1e-43 180.6 188 58.5
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 1.7e-42 176.8 182 59.3
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 2.2e-42 176.4 182 59.3
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 3.1e-41 172.6 204 49.0
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 5.3e-41 171.8 196 51.0
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 7.7e-40 167.9 161 57.1
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.9e-39 166.0 193 53.4
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 6.3e-34 148.3 173 52.0
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 4.1e-33 145.6 202 47.5
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 7.7e-32 141.4 121 57.0
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 1.7e-31 140.2 106 63.2
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 6.5e-31 138.3 106 67.9
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 8.5e-31 137.9 159 48.4
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 8.8e-28 127.9 163 43.6
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 1.6e-24 117.1 176 45.5
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 3.2e-22 109.4 181 40.9
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 3.6e-21 105.9 104 59.6
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 6.3e-18 95.1 75 65.3
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 6.5e-15 85.1 154 33.1
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 8.5e-15 84.7 78 59.0
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 9.4e-14 81.3 127 36.2


User provided reference genes

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