Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 3.8e-126 454.9 242 100.0
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 1.4e-67 260.4 189 67.7
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 6.9e-67 258.1 192 66.7
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 4.5e-66 255.4 189 66.7
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 7.6e-66 254.6 189 67.7
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 3.8e-65 252.3 179 69.3
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 9.3e-64 247.7 189 63.5
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.2e-63 247.3 189 65.1
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.6e-63 246.9 189 65.1
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 3.5e-63 245.7 189 64.6
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 6.0e-63 245.0 189 64.6
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 3.9e-62 242.3 189 64.0
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 3.7e-60 235.7 189 67.2
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 1.4e-59 233.8 189 62.4
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.4e-59 233.8 189 62.4
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.4e-59 233.8 189 62.4
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 2.4e-59 233.0 189 60.8
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 4.1e-59 232.3 198 62.1
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 5.3e-59 231.9 189 60.3
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 6.9e-59 231.5 189 61.9
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 1.2e-58 230.7 189 64.6
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 2.0e-58 229.9 179 69.8
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 2.0e-58 229.9 191 68.1
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 2.0e-58 229.9 189 62.4
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 2.6e-58 229.6 191 62.8
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 4.5e-58 228.8 190 61.6
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 4.5e-58 228.8 179 68.7
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 4.5e-58 228.8 189 62.4
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 7.6e-58 228.0 189 62.4
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 7.6e-58 228.0 189 62.4
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 7.6e-58 228.0 178 70.8
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 7.6e-58 228.0 190 61.6
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 1.0e-57 227.6 180 71.7
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 1.0e-57 227.6 195 58.5
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 1.3e-57 227.3 190 61.1
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 1.3e-57 227.3 189 61.9
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 1.7e-57 226.9 191 64.9
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 6.5e-57 224.9 189 65.1
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 1.4e-56 223.8 189 65.1
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 1.9e-56 223.4 179 63.7
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 1.9e-56 223.4 189 64.6
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 3.2e-56 222.6 212 60.8
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 9.3e-56 221.1 193 62.2
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 9.3e-56 221.1 190 63.7
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 1.2e-55 220.7 189 66.1
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.6e-55 220.3 189 63.5
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 2.7e-55 219.5 190 60.5
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 3.5e-55 219.2 189 61.9
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 1.3e-54 217.2 178 66.3
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 1.8e-54 216.9 189 59.3
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 3.0e-54 216.1 178 63.5
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 5.1e-54 215.3 190 57.4
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 6.7e-54 214.9 189 59.3
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 6.7e-54 214.9 180 61.1
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 8.7e-54 214.5 189 60.8
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 2.5e-53 213.0 178 62.9
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 2.5e-53 213.0 186 59.1
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 4.3e-53 212.2 189 57.7
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 5.7e-53 211.8 189 59.8
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 7.4e-53 211.5 178 62.4
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 9.7e-53 211.1 175 58.9
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 1.3e-52 210.7 189 58.7
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 1.6e-52 210.3 189 59.3
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 3.7e-52 209.1 189 58.7
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 4.8e-52 208.8 205 54.1
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 8.2e-52 208.0 189 58.2
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 1.8e-51 206.8 212 53.3
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 2.4e-51 206.5 191 58.1
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 5.3e-51 205.3 190 56.8
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 5.3e-51 205.3 189 60.8
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 2.0e-50 203.4 120 80.0
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 2.6e-50 203.0 189 63.5
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 5.9e-50 201.8 178 58.4
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 7.7e-50 201.4 189 57.7
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 1.0e-49 201.1 189 58.7
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 1.3e-49 200.7 189 57.7
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 1.3e-49 200.7 189 58.7
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 1.7e-49 200.3 189 63.0
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 2.9e-49 199.5 178 58.4
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 2.9e-49 199.5 189 58.2
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 5.0e-49 198.7 180 56.7
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 5.0e-49 198.7 189 55.6
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 6.5e-49 198.4 117 79.5
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 4.6e-47 192.2 189 57.1
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 7.9e-47 191.4 178 57.3
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 7.9e-47 191.4 180 55.0
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 1.0e-46 191.0 189 55.0
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.8e-44 183.0 168 56.0
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 4.8e-44 182.2 192 55.2
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 8.2e-44 181.4 189 53.4
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 3.1e-43 179.5 191 57.6
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 1.2e-42 177.6 175 56.6
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 7.7e-42 174.9 189 50.8
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 1.7e-41 173.7 190 52.1
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 5.0e-41 172.2 121 67.8
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 1.4e-40 170.6 191 47.1
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 1.4e-40 170.6 190 59.5
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 2.1e-39 166.8 168 53.6
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 4.1e-35 152.5 174 48.3
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 4.1e-35 152.5 188 47.9
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 2.2e-28 130.2 122 54.1
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 1.7e-25 120.6 188 39.9
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 9.4e-24 114.8 117 47.0
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 1.0e-17 94.7 182 35.7
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.5e-16 90.1 49 83.7
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 2.4e-11 73.6 121 38.8
BcaB01g03423 Brassica carinata HOM05D001990 ORTHO05D002033 9.2e-11 71.6 86 48.8
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 1.5e-08 64.3 101 45.5


User provided reference genes

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