Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 5.8e-211 737.3 361 100.0
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.2e-131 473.8 343 67.6
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 7.7e-131 471.1 345 67.5
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.0e-127 460.7 350 65.1
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 3.0e-127 459.1 352 64.8
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.0e-127 459.1 360 62.5
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 4.0e-127 458.8 349 65.6
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 1.2e-126 457.2 345 65.5
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 3.4e-126 455.7 352 64.8
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 4.4e-126 455.3 364 63.2
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 5.7e-126 454.9 353 64.9
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.2e-125 453.0 360 61.4
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 2.8e-125 452.6 355 63.7
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 3.7e-125 452.2 350 65.1
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 8.3e-125 451.1 343 63.3
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 8.3e-125 451.1 352 65.6
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.1e-124 450.7 347 65.7
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.4e-124 450.3 343 63.3
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.8e-124 449.9 382 61.3
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.8e-124 449.9 355 63.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 2.4e-124 449.5 347 65.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.4e-124 449.5 343 63.3
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 4.1e-124 448.7 355 64.5
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 9.2e-124 447.6 363 62.8
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.2e-123 447.2 351 63.2
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.7e-122 443.4 352 64.5
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.3e-122 443.0 345 65.2
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 3.8e-122 442.2 349 63.0
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 6.6e-122 441.4 341 64.5
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 4.3e-121 438.7 353 64.6
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 2.8e-120 436.0 341 63.9
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.0e-119 434.1 353 62.6
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 8.9e-119 431.0 357 63.3
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 7.5e-118 427.9 344 64.0
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.7e-117 426.8 351 62.1
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 2.2e-117 426.4 360 62.8
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 6.4e-117 424.9 347 64.3
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.1e-116 424.1 350 61.1
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 9.2e-116 421.0 352 61.4
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 9.2e-116 421.0 345 61.7
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 9.2e-116 421.0 351 62.1
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 3.5e-115 419.1 353 59.2
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 5.9e-115 418.3 354 61.3
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.3e-114 417.2 346 61.6
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.7e-114 416.8 352 60.5
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 3.0e-114 416.0 344 60.8
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.0e-114 415.2 343 61.5
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.1e-113 414.1 387 56.3
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.5e-113 413.7 346 60.7
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 5.6e-113 411.8 350 60.6
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 7.3e-113 411.4 355 61.7
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 6.2e-112 408.3 351 60.7
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.0e-111 407.5 349 61.6
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 2.3e-111 406.4 349 61.0
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 3.1e-111 406.0 341 60.1
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 3.1e-111 406.0 344 60.2
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 5.2e-111 405.2 351 60.1
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.0e-110 403.3 346 59.2
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.4e-110 402.5 350 59.4
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.3e-109 400.6 353 56.7
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 1.7e-109 400.2 349 59.6
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 6.4e-109 398.3 349 59.3
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 6.4e-109 398.3 349 59.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.9e-108 396.7 354 57.9
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 2.4e-108 396.4 341 58.9
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 3.2e-108 396.0 348 58.6
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 4.1e-108 395.6 352 56.8
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 5.4e-108 395.2 354 55.1
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 5.4e-108 395.2 350 59.7
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 5.4e-108 395.2 362 57.2
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 9.2e-108 394.4 352 56.2
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 3.5e-107 392.5 347 57.6
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.0e-106 391.0 348 59.8
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.1e-105 387.5 349 56.7
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.5e-105 387.1 347 57.3
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 3.3e-105 386.0 353 55.5
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 4.3e-105 385.6 353 56.4
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 7.3e-105 384.8 352 57.1
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 7.3e-105 384.8 347 58.8
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.8e-104 382.9 348 56.6
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 2.8e-104 382.9 353 55.2
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 8.1e-104 381.3 343 56.9
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 8.1e-104 381.3 342 58.8
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-103 380.6 342 58.5
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-103 380.2 342 58.5
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 3.1e-103 379.4 350 55.7
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.2e-102 377.5 347 55.9
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.7e-101 373.6 350 54.0
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.2e-101 373.2 342 58.2
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.9e-101 372.9 342 57.9
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 6.4e-101 371.7 345 55.4
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.4e-100 370.5 381 53.3
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 1.4e-100 370.5 341 54.3
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.4e-100 369.8 343 57.1
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 4.1e-100 369.0 346 55.8
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 3.5e-99 365.9 355 52.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 4.7e-96 355.5 440 46.4
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 5.2e-95 352.1 343 53.1
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 5.8e-94 348.6 345 53.3
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.4e-92 344.0 354 53.1
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 1.9e-92 343.6 352 53.1
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 3.2e-92 342.8 353 52.7
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 5.4e-92 342.0 299 60.9
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 5.1e-90 335.5 354 49.7
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 8.4e-85 318.2 276 59.4
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.2e-78 297.7 349 46.4
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 6.7e-74 282.0 240 58.3
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 2.1e-72 276.9 242 57.4
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 8.1e-72 275.0 308 50.6
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.1e-65 254.6 243 52.7
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 5.3e-63 245.7 345 41.2
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.2e-59 234.6 198 62.6
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.6e-59 234.2 191 64.4
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.9e-57 227.3 203 57.1
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 6.3e-56 222.2 351 37.3
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.0e-50 204.9 346 36.1
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.2e-45 187.2 173 57.8
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 4.2e-44 183.0 209 47.8
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 6.7e-42 175.6 187 50.8
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 2.2e-37 160.6 179 50.3
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.6e-35 154.5 190 50.5
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 4.7e-35 152.9 248 35.9
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.4e-33 146.4 205 41.0
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 3.4e-17 93.6 69 59.4
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 7.7e-14 82.4 79 53.2
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.0e-13 82.0 79 53.2
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.3e-13 80.9 56 62.5
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.3e-13 80.9 56 62.5
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.3e-13 80.9 56 62.5
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.9e-13 80.5 79 51.9
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.9e-12 77.8 56 60.7
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.2e-12 76.6 97 44.3
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 6.8e-10 69.3 135 32.6
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 8.8e-10 68.9 63 54.0
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.7e-09 66.2 59 54.2
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 7.5e-09 65.9 49 57.1
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 7.5e-09 65.9 49 57.1
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.2e-06 58.5 114 32.5
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 5.9e-06 56.2 44 59.1


User provided reference genes

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